EST details — SGN-E304642
| Search information |
| Request: 304642 | Match: SGN-E304642 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C92429 | Clone name: cLEX-11-E1 |
| ||
| Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192388 [TUS-65-H18] | Trace: SGN-T344463 | EST: SGN-E543588 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192388 [TUS-65-H18] | Trace: SGN-T344464 | EST: SGN-E543589 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E304642 | Length: 648 bp (805 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E304642 [] (trimmed)
CAAATTACAAAAATGCCGCCGGCGAAGCAGCTCCGGGATCTGTTCACGGCGATACTGCTTGTTTTTATTATTGCGGCGGCGGCGAACTTGCCGGT
TATGGTACTTTCCGGCGCCGGTGATGTCCGCAGATCGGATTTTCCTGATACTTTCGTTTTCGGTGCCGGTTCTTCTGCTTATCAAGTTGAAGGGG
CAGCATTTGAAGATGGAAGGATGCCTAGCATTTGGGACACCTTTGCTCATGCTGGTATTTATGGAGGAGCCAACGCGGATGTATCTTGTGACGCA
TACCATAAATACAAGGAAGATGTAAAACTCATGGCTGATATGGGTTTGGAAGGGTACAGATTTTCTATTTCGTGGTCGAGACTTATTCCAAATGG
AAGAGGTTCGATTAATCCTAAAGGGTTACAGTATTACAACAATCTCATCAATGAGCTCCTCCGTCATGGAATTCAACCACATATTACGTTATGTC
ACAGTGATATACCACAAACGCTTCAAGATGAATATGGTGGATGGATGAGTCGAAAGATAATCGATGATTTCACTGCTTATGCGGATGTGTGCTTC
AAGGAATTCGGTGACAGAGTTTCATATTGGACTACATTAAATGAAGTCAATGTGTTCACTATAGGTGGTTATGATAAT
TATGGTACTTTCCGGCGCCGGTGATGTCCGCAGATCGGATTTTCCTGATACTTTCGTTTTCGGTGCCGGTTCTTCTGCTTATCAAGTTGAAGGGG
CAGCATTTGAAGATGGAAGGATGCCTAGCATTTGGGACACCTTTGCTCATGCTGGTATTTATGGAGGAGCCAACGCGGATGTATCTTGTGACGCA
TACCATAAATACAAGGAAGATGTAAAACTCATGGCTGATATGGGTTTGGAAGGGTACAGATTTTCTATTTCGTGGTCGAGACTTATTCCAAATGG
AAGAGGTTCGATTAATCCTAAAGGGTTACAGTATTACAACAATCTCATCAATGAGCTCCTCCGTCATGGAATTCAACCACATATTACGTTATGTC
ACAGTGATATACCACAAACGCTTCAAGATGAATATGGTGGATGGATGAGTCGAAAGATAATCGATGATTTCACTGCTTATGCGGATGTGTGCTTC
AAGGAATTCGGTGACAGAGTTTCATATTGGACTACATTAAATGAAGTCAATGTGTTCACTATAGGTGGTTATGATAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E304642] | SGN-U583154 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T116998 [Download] [View] | Facility Assigned ID: TRXBO25TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.983 | Expected Error Rate: 0.0031 | Quality Trim Threshold: 14.5 |
Working
