EST details — SGN-E304834
Search information |
Request: 304834 | Match: SGN-E304834 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C92205 | Clone name: cLEX-10-H6 |
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Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E304834 | Length: 506 bp (658 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E304834 [] (trimmed)
GGTAAAAACCCATTAATTATGAGTGATTACAAAATCCCCAAAATTAATCTCACCAAATTAGACAAGCACTCAAATTCTTGGGTACCATTATGCAA
TGAGGTTCGACATGCCCTTGAAGAACATGGTTATTTTATAGCACTATATGAGGATGCTAATAATAAAATTTCCAAGGAAATATTTGATGTAATGG
AAGAATTATTTGATCTCCCCATCGAAACAAAGAGAAAAAACACTTCAGACGTTTACTTCTATCGTTACAAAGGTCAATTATTAACCGCTCCTCTT
CACGAAAGCTTTGGAATCCCACATCCAACTGATGTTGAAGCACTTCAAAGCTTCACCACACTTATGTGGCCACAAGGCAACCAAAGATTTTGTGA
AACAATGACATCGTACATAAAGGTAGGAGCAGAAATAGAACAGTTGGTTGATAAAATGGTGTTTGAAAGCTACGGATTACCAGAAAAGCACTACG
AATCTCATGTCGCAGCTACTACATACCTCCT
TGAGGTTCGACATGCCCTTGAAGAACATGGTTATTTTATAGCACTATATGAGGATGCTAATAATAAAATTTCCAAGGAAATATTTGATGTAATGG
AAGAATTATTTGATCTCCCCATCGAAACAAAGAGAAAAAACACTTCAGACGTTTACTTCTATCGTTACAAAGGTCAATTATTAACCGCTCCTCTT
CACGAAAGCTTTGGAATCCCACATCCAACTGATGTTGAAGCACTTCAAAGCTTCACCACACTTATGTGGCCACAAGGCAACCAAAGATTTTGTGA
AACAATGACATCGTACATAAAGGTAGGAGCAGAAATAGAACAGTTGGTTGATAAAATGGTGTTTGAAAGCTACGGATTACCAGAAAAGCACTACG
AATCTCATGTCGCAGCTACTACATACCTCCT
Unigenes |
Current Unigene builds | |||||
[SGN-E304834] | SGN-U569664 | Tomato 200607 | Build 2 | 29 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T116608 [Download] [View] | Facility Assigned ID: TRXBN39TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.955 | Expected Error Rate: 0.0009 | Quality Trim Threshold: 14.5 |