EST details — SGN-E305014
| Search information |
| Request: 305014 | Match: SGN-E305014 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C92065 | Clone name: cLEX-10-A10 |
| ||
| Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192319 [TUS-65-E21] | Trace: SGN-T344344 | EST: SGN-E543469 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192319 [TUS-65-E21] | Trace: SGN-T344345 | EST: SGN-E543470 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E305014 | Length: 487 bp (907 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E305014 [] (trimmed)
GCCAGCTCACCTGCAAATTTTTTCAACTGTCTCTCTATATTCAGATCTCCGTTGATCCACCGCCGTATCGGTAAATCATGTCGTACGCATATCTC
TTCAAGTATATTATCATCGGCGATACTGGAGTTGGAAAGTCATGTCTACTTTTGCAATTTACGGACAAACGGTTTCAACCAGTTCATGACCTGAC
CATCGGGGTTGAATTTGGGGCTCGAATGATCACAATCGACAACAAACCAATTAAACTACAGATCTGGGACACGGCTGGTCAAGAATCATTCAGAT
CCATCACAAGGTCATATTACAGAGGGGCTGCGGGCGCATTACTTGTTTATGATATTACAAGTTGGTTAGAAGATGCAAGACAGCATGCAAATGCA
AACATGACCATAATGCTGATTGGGAACAAGTGTGATCTGGCTCATAGAAGGGCTGTAAGCACAGAAGAAGGTGAGCAGTTTGCCAAAGAAAACGG
ATTGATATTCAT
TTCAAGTATATTATCATCGGCGATACTGGAGTTGGAAAGTCATGTCTACTTTTGCAATTTACGGACAAACGGTTTCAACCAGTTCATGACCTGAC
CATCGGGGTTGAATTTGGGGCTCGAATGATCACAATCGACAACAAACCAATTAAACTACAGATCTGGGACACGGCTGGTCAAGAATCATTCAGAT
CCATCACAAGGTCATATTACAGAGGGGCTGCGGGCGCATTACTTGTTTATGATATTACAAGTTGGTTAGAAGATGCAAGACAGCATGCAAATGCA
AACATGACCATAATGCTGATTGGGAACAAGTGTGATCTGGCTCATAGAAGGGCTGTAAGCACAGAAGAAGGTGAGCAGTTTGCCAAAGAAAACGG
ATTGATATTCAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E305014] | SGN-U562693 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T116788 [Download] [View] | Facility Assigned ID: TRXBL05TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0067 | Quality Trim Threshold: 14.5 |
Working
