Notice: After server upgrades, BLAST should be back now. Apologies for any inconvenience.

EST details — SGN-E305434

Search information 
Request: 305434Match: SGN-E305434
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C93756Clone name: cLEX-15-K12
cartOrder Clone
Library Name: cLEXOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: root
Development Stage: fruit-set stage/post-fruit loading

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E305434Length: 531 bp (875 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E305434 [] (trimmed) CCGGCGACGATCCGATTTTCCGGCGATATCCAACCGTAGAGAACAGAGACATCCTGCTTCCCTTCGTCTTGGATCAGTCGACTTCTTCGTTTCGC
AAAATCATGAATCCCGAATATGATTATTTGTTCAAACTTTTGTTAATAGGAGATTCAGGTGTTGGAAAGTCATGTCTTCTCCTGAGATTTGCCGA
TGATTCTTATTTGGACAGCTACATCAGCACAATTGGTGTTGACTTTAAAATACGTACTGTGGAGCAAGATGGGAAGACTATTAAACTTCAAATTT
GGGACACTGCTGGACAAGAACGTTTCAGGACAATCACAAGTAGTTACTACCGTGGGGCACATGGCATTATAATAGTTTATGATATAACTGATCAA
GAAAGTTTCAACAATGTTAAGCAATGGTTGAGTGAAATTGATCGCTATGCAAGCGAAAACGTGAACAAGCTTTTGGTTGGAAATAAGTCTGACTT
GAATGATAACCGAGCTGTGTCTTATGATACAGCAAAGGCTTTTGCTGATGAAATTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E305434] SGN-U577954 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T117920 [Download] [View] Facility Assigned ID: TRXCF66TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.974 Expected Error Rate: 0.0070 Quality Trim Threshold: 14.5