EST details — SGN-E305529
| Search information |
| Request: 305529 | Match: SGN-E305529 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C93216 | Clone name: cLEX-14-A23 |
| ||
| Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192537 [TUS-65-N23] | Trace: SGN-T344719 | EST: SGN-E543844 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192537 [TUS-65-N23] | Trace: SGN-T344720 | EST: SGN-E543845 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E305529 | Length: 620 bp (838 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E305529 [] (trimmed)
GTGTATTTCTTACTATTCCCTTCAACATTTTCCTCTATTTGAAGAGCTACTTACTTTCCATACACTTAGTTCAGATCTCGAGATGATGAAAGTAG
TGCTGAAGTTGGAGTATGTGGATGAAAAAGTCAAGCAAAAGGTGATGAAAAAAGTTTCTGTTGTGGAAGGTACGTTTTATTGTTCAAAATTATGT
CAGAATTCCAGATCTTGCAATAGATTTATTTTTTGTTGTTTCTGATGATGTTGCAGGGGTAGAGTCAATGTCGATGGATACAAAGGACAAGAAAT
TGACAGTAGTCGGAAATGTAGATCCAGTTGTAATAGTTTCAAAATTGAAGAAACTGTGTCACACTGAGATAGTATTGGTTGGACCAGCAAAAGAG
CCGGAGAAGAAGAAAGATAATGAGCCGAAGAAAACAGAAGACAAAAAGAAAGCGGCAGCGATAAAGGCATATCCAGCTCCAGTTCTCTATCAATA
TCAATATCAACAACCTTATCCACAGTACCCAACCCCTGTTCCTGCTTATCAGCACTATTACAGTGTGGAAGAGGACTCTAACTCTTGTGTGATCT
GCTAGCTTCACATTTGTGATGAGTTAGTGGACTAGTTCATACAAGCCTCC
TGCTGAAGTTGGAGTATGTGGATGAAAAAGTCAAGCAAAAGGTGATGAAAAAAGTTTCTGTTGTGGAAGGTACGTTTTATTGTTCAAAATTATGT
CAGAATTCCAGATCTTGCAATAGATTTATTTTTTGTTGTTTCTGATGATGTTGCAGGGGTAGAGTCAATGTCGATGGATACAAAGGACAAGAAAT
TGACAGTAGTCGGAAATGTAGATCCAGTTGTAATAGTTTCAAAATTGAAGAAACTGTGTCACACTGAGATAGTATTGGTTGGACCAGCAAAAGAG
CCGGAGAAGAAGAAAGATAATGAGCCGAAGAAAACAGAAGACAAAAAGAAAGCGGCAGCGATAAAGGCATATCCAGCTCCAGTTCTCTATCAATA
TCAATATCAACAACCTTATCCACAGTACCCAACCCCTGTTCCTGCTTATCAGCACTATTACAGTGTGGAAGAGGACTCTAACTCTTGTGTGATCT
GCTAGCTTCACATTTGTGATGAGTTAGTGGACTAGTTCATACAAGCCTCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E305529] | SGN-U572794 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T118015 [Download] [View] | Facility Assigned ID: TRXCA12TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0101 | Quality Trim Threshold: 12.5 |
Working
