EST details — SGN-E305611
Search information |
Request: 305611 | Match: SGN-E305611 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C93511 | Clone name: cLEX-14-O16 |
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Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C180142 [TUS-33-J12] | Trace: SGN-T186992 | EST: SGN-E374378 | Direction: 3' | Facility: INRA |
Clone: SGN-C180142 [TUS-33-J12] | Trace: SGN-T186993 | EST: SGN-E374379 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E305611 | Length: 678 bp (854 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E305611 [] (trimmed)
GCTCAGCGCTTCCGGCGACTATTTCCGTCAAAGGTACTTGGTGAAAATTCTTCGAGTAACGAAGTTCTGTTGGAGCTGATTAGGGATGGCTCCAA
AGCAGCCAAATACAGGCCTTTCTGTGGGTCTTAACAAAGGACATGTTGTTACTAAGAAAGAGTTGGCTCCCCGCCCTTCTGATAGAAAAGGGAAA
ACCAGTAAGAGAATACATTTTGTTAGAAGCCTTATCAGGGAAGTAGCTGGTTTTGCACCTTATGAGAAGAGAATTACTGAGCTTCTTAAAGTTGG
AAAAGACAAACGTGCTCTTAAGGTAGCCAAGAGGAAGCTGGGTACTCACAAGAGAGCAAAGAAGAAGCGTGAAGAGATGTCCAGTGTTCTCCGTA
AAATGAGGGCTACTGGAGGTGGTGAAAAGAAGAAATGAGTTGTATGCTAACCCCTCAATATGAAATGTTAGGTTCTGAAACTGCTTTGCCAAGAT
CTACTTTTTAGTATCTATTTGATTTTTGATCATTTTTATTGTTGAACACGTAACACTCAGCCTTTTATCGCTTTTGTTTCAGTACGAGAATTGTT
CAATTTTTTTTTGACATTTCGATTTTGCAACTCATTTGTATGTGAATTAAAACTGTACCAAGTCTTGTATCTGGAATACCAGATACATTTTGTAA
TGTACATACTTAA
AGCAGCCAAATACAGGCCTTTCTGTGGGTCTTAACAAAGGACATGTTGTTACTAAGAAAGAGTTGGCTCCCCGCCCTTCTGATAGAAAAGGGAAA
ACCAGTAAGAGAATACATTTTGTTAGAAGCCTTATCAGGGAAGTAGCTGGTTTTGCACCTTATGAGAAGAGAATTACTGAGCTTCTTAAAGTTGG
AAAAGACAAACGTGCTCTTAAGGTAGCCAAGAGGAAGCTGGGTACTCACAAGAGAGCAAAGAAGAAGCGTGAAGAGATGTCCAGTGTTCTCCGTA
AAATGAGGGCTACTGGAGGTGGTGAAAAGAAGAAATGAGTTGTATGCTAACCCCTCAATATGAAATGTTAGGTTCTGAAACTGCTTTGCCAAGAT
CTACTTTTTAGTATCTATTTGATTTTTGATCATTTTTATTGTTGAACACGTAACACTCAGCCTTTTATCGCTTTTGTTTCAGTACGAGAATTGTT
CAATTTTTTTTTGACATTTCGATTTTGCAACTCATTTGTATGTGAATTAAAACTGTACCAAGTCTTGTATCTGGAATACCAGATACATTTTGTAA
TGTACATACTTAA
Unigenes |
Current Unigene builds | |||||
[SGN-E305611] | SGN-U581074 | Tomato 200607 | Build 2 | 14 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T118097 [Download] [View] | Facility Assigned ID: TRXCB92TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.967 | Expected Error Rate: 0.0030 | Quality Trim Threshold: 12.5 |