EST details — SGN-E305685
Search information |
Request: 305685 | Match: SGN-E305685 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C93498 | Clone name: cLEX-14-N4 |
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Library Name: cLEX | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: fruit-set stage/post-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C180137 [TUS-33-J7] | Trace: SGN-T186744 | EST: SGN-E374130 | Direction: 3' | Facility: INRA |
Clone: SGN-C180137 [TUS-33-J7] | Trace: SGN-T186745 | EST: SGN-E374131 | Direction: 5' | Facility: INRA |
Sequence |
Sequence Id: SGN-E305685 | Length: 455 bp (884 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E305685 [] (trimmed)
GAATCTTCAAAGAGCCTTCCTTATACACACAAAATAAGAGGTACATAATTCCTTCTAAATTTTCATATCTTACACTTTCTTTTTTCATAAAGGTT
ACATACGTGATGTCGAATTCAGATAGAAGAAGTAACCATATCGCGATTATACTAGTTATAACAATCCTTCAATTTCTACTCCTAAATATTGTTAA
AGCCCATGACTACAACACATTTCAAGAATTGCCATCTACACAAGATGAAGCAAACTTCAGGCCAAGTATAGCTGTTGTTATTGGTATTCTCTCCA
TCATGTTTTCCTTAACATTCCTTCTACTTCTCTATGCCAAATTCTGTCGTAGATCGTCTCTACCTCTCCACAACGCGATGCAAATGGATCAAGAT
AGACTAACAACGCTCCCAATGGCACGAGTTTCCTCAGGTATAGATAAAACTATCATAGAATCACTCCCTTTTTTC
ACATACGTGATGTCGAATTCAGATAGAAGAAGTAACCATATCGCGATTATACTAGTTATAACAATCCTTCAATTTCTACTCCTAAATATTGTTAA
AGCCCATGACTACAACACATTTCAAGAATTGCCATCTACACAAGATGAAGCAAACTTCAGGCCAAGTATAGCTGTTGTTATTGGTATTCTCTCCA
TCATGTTTTCCTTAACATTCCTTCTACTTCTCTATGCCAAATTCTGTCGTAGATCGTCTCTACCTCTCCACAACGCGATGCAAATGGATCAAGAT
AGACTAACAACGCTCCCAATGGCACGAGTTTCCTCAGGTATAGATAAAACTATCATAGAATCACTCCCTTTTTTC
Unigenes |
Current Unigene builds | |||||
[SGN-E305685] | SGN-U577130 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T118171 [Download] [View] | Facility Assigned ID: TRXCD74TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.943 | Expected Error Rate: 0.0125 | Quality Trim Threshold: 14.5 |