EST details — SGN-E306147
| Search information |
| Request: 306147 | Match: SGN-E306147 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C95930 | Clone name: cLEY-13-N4 |
| ||
| Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192841 [TUS-66-K15] | Trace: SGN-T345241 | EST: SGN-E544366 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192841 [TUS-66-K15] | Trace: SGN-T345242 | EST: SGN-E544367 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E306147 | Length: 532 bp (889 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E306147 [] (trimmed)
CCCCGGCTTGCAGGAATTTCGGCAAGGACTAAGTCTATACATGGAGAACAAGAACAAAGCTGAATATTATAGTCCTGATGATGAAGATCGCGATA
TCGATAATCAAGAAAATATTATCCATCAAGGAGGTGCTGTTAATGTTATGGTAAAGAGAGAAAGATCCCCACCGGAACACAACTCAATGGCTTCT
TCATCTACTCACAAAGAACAGGACGATCAGCTAGCATCAGCCAAAGATGAAATGCGAGAAGTAATGGAAGAAAATCAGAGGCTTCGAATGCACTT
AGATCGAATGATGAAGGAATATCGAAATCTCCAGAACCAATTTCACGATATCGTTCAAAAAGAAACTGATCAAAAATCAAGCAGTACTACTGTCA
ACACTAGTACAACACATCATGATCATGAATCTGATCAAGAAGCTGATCAACTTGTGTCCCTCAGCTTAAGAAGAACTACTAGCGATATGAAGAAA
GATGATTTATCTAAAATCTTAAAGAAAGATAAAGTTCATGACGATGAAGGAGTTAGT
TCGATAATCAAGAAAATATTATCCATCAAGGAGGTGCTGTTAATGTTATGGTAAAGAGAGAAAGATCCCCACCGGAACACAACTCAATGGCTTCT
TCATCTACTCACAAAGAACAGGACGATCAGCTAGCATCAGCCAAAGATGAAATGCGAGAAGTAATGGAAGAAAATCAGAGGCTTCGAATGCACTT
AGATCGAATGATGAAGGAATATCGAAATCTCCAGAACCAATTTCACGATATCGTTCAAAAAGAAACTGATCAAAAATCAAGCAGTACTACTGTCA
ACACTAGTACAACACATCATGATCATGAATCTGATCAAGAAGCTGATCAACTTGTGTCCCTCAGCTTAAGAAGAACTACTAGCGATATGAAGAAA
GATGATTTATCTAAAATCTTAAAGAAAGATAAAGTTCATGACGATGAAGGAGTTAGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E306147] | SGN-U571280 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T119325 [Download] [View] | Facility Assigned ID: TRYBZ74TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.942 | Expected Error Rate: 0.0083 | Quality Trim Threshold: 14.5 |
Working
