Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E306688

Search information 
Request: 306688Match: SGN-E306688
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C97078Clone name: cLEY-19-K1
cartOrder Clone
Library Name: cLEYOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: root
Development Stage: pre-anthesis/pre-fruit loading

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E306688Length: 640 bp (895 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E306688 [] (trimmed) GAGATTAATCCAGATGTTGAAAGGCTTCCTCTTTGTTTGGCTTATTGCTTTTTCTTTAGCAACAATAGCTGTTGCACAAAACAACCAAACAGGAT
TCATAAGCCTAGATTGTGGAATACCAGCACGTTCAAACTATACAGATATAACAACAGGACTATTTTACACTTCAGATGTAGGTTATGTCAGTGGT
GGGGTGAAAAATAACATATCATCAAAATACCAATCCAATTCCCTAGAAAGACAATTTCTCACAGTTACAAGCTTTCCAACAGGGACCAAAAATTG
CTACACTTTGACTCCAGCTCAAGGAAACTCTGGCAGATACTTGATAAGGGCAAGTTTTTTTCTACGGAGATTATGATAATGGAAATGATCGATTC
CCCTATTTTGATCTTTACATTGAAGAAAAATATTGGATCACAATCTCAATTTATAATGCTTCTATACCAATTCAAGAGGAAATTATACACACCCC
TTCTAATGCCTCTATAAATATTTGCCTTGTCAAGTTAGATACAACAACTCCTTTCATTTCAGCCTTAGAGTTAAGGCCTTTGAATAATACCATAT
ACAAAGCAATACTCAACAGTTCAATGGAACTTTTTATCCGTCTTGACCTTGGTTCCTTAACCAATCAGTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E306688] SGN-U567709 Tomato 200607 Build 2 5 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T120535 [Download] [View] Facility Assigned ID: TRYCU61THD
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.951 Expected Error Rate: 0.0036 Quality Trim Threshold: 14.5