EST details — SGN-E306882
Search information |
Request: 306882 | Match: SGN-E306882 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C95430 | Clone name: cLEY-11-N4 |
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Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E306882 | Length: 528 bp (876 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E306882 [] (trimmed)
GTTCAACCGCACCACCTAAAGGACAGACGATTAATATCAAAGATGAAGGATCTGCTTGGAAAAAGTTTGGGTGCTGTTCGAGCTAGGGCTCACGT
AAGACAATAGCTCAAGCTTTATATATCAGTTGTAAATTGTCATTAAATCAATGATTTCCTCTCCCTGTTTTCTCTCACTTTGGGTATCGCGATTG
TGGGATATAAGATTTATTCTATAGTCATGAGAATACGTGAAGCAGCGCGTTCTCATGAAAAATTCCGAAGGAGGATCAGGTACTGCTAGTTTCTA
ATTACAGAATGTCTAAACAAGGTCTTAGTTTTATGTTTTCTGGTTGATGGCTTGAAAAACTGGAGATATCTTTGCAATAACCTGTTACCGAATAT
CTTCTTATTTGTCTCGAATTTACGTCTTAATTATTTTTCCCCTTCTAAAAGTGTATTTCCTGAGCTGAGTAGCAATGTTTGTTGTTCATGATATG
TGTAGTTTGATAAATTAAAGTAGAACATGGCAAGGTGTGCCCAGAGTTGATTT
AAGACAATAGCTCAAGCTTTATATATCAGTTGTAAATTGTCATTAAATCAATGATTTCCTCTCCCTGTTTTCTCTCACTTTGGGTATCGCGATTG
TGGGATATAAGATTTATTCTATAGTCATGAGAATACGTGAAGCAGCGCGTTCTCATGAAAAATTCCGAAGGAGGATCAGGTACTGCTAGTTTCTA
ATTACAGAATGTCTAAACAAGGTCTTAGTTTTATGTTTTCTGGTTGATGGCTTGAAAAACTGGAGATATCTTTGCAATAACCTGTTACCGAATAT
CTTCTTATTTGTCTCGAATTTACGTCTTAATTATTTTTCCCCTTCTAAAAGTGTATTTCCTGAGCTGAGTAGCAATGTTTGTTGTTCATGATATG
TGTAGTTTGATAAATTAAAGTAGAACATGGCAAGGTGTGCCCAGAGTTGATTT
Unigenes |
Current Unigene builds | |||||
[SGN-E306882] | SGN-U564990 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T118806 [Download] [View] | Facility Assigned ID: TRYBR74TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.961 | Expected Error Rate: 0.0003 | Quality Trim Threshold: 12.5 |