EST details — SGN-E307407
| Search information |
| Request: 307407 | Match: SGN-E307407 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C95526 | Clone name: cLEY-12-E18 |
| ||
| Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192769 [TUS-66-H15] | Trace: SGN-T345117 | EST: SGN-E544242 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192769 [TUS-66-H15] | Trace: SGN-T345118 | EST: SGN-E544243 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E307407 | Length: 554 bp (809 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E307407 [] (trimmed)
GTTTTTTTTTAGGTATTGCAAAATATGGGATTAGGTGGTGATGGTGAAAAGGGGGAGTCTTGGGATGTAGAGAAATCAAAGGGGAAGAAGAAGAA
AGAGGTTGTTGAAGAGGAAACTGGATGTTGGACTAAGTTGTGGTTTATTGGTAGCTGTATCTCTTCAAGATCTAAAGTTGATAGCTCCATAAGTG
GCATCAGTACTCACTGTGAAAGTAAATCTACAAATGACACAAGCAGAGACCAACCTGTTGCACCAATTATCTCATCTACGACTACCAGCAATGCG
GAAAGTAATTCATCCACCTCCAAACTTGAAGAGGAGCTTAAAGTTTCTTCTCGGCTTCGAAAATTCGCATTTAACGATTTGAAGTTGGCAACAAG
AAACTTCAGACCAGAGTCCCTTCTTGGTGAAGGGGGTTTCGGATGTGTCTTCAAGGGGTGGATCGAAGAGAATGGCACAGCACCTGTTAAACCAG
GGACAGGGCTTACTGTTGCTGTGAAAACTCTAAATCATGATGGACTTCAGGGTCACAAAGAATGGCTGGCTGAAGTGAA
AGAGGTTGTTGAAGAGGAAACTGGATGTTGGACTAAGTTGTGGTTTATTGGTAGCTGTATCTCTTCAAGATCTAAAGTTGATAGCTCCATAAGTG
GCATCAGTACTCACTGTGAAAGTAAATCTACAAATGACACAAGCAGAGACCAACCTGTTGCACCAATTATCTCATCTACGACTACCAGCAATGCG
GAAAGTAATTCATCCACCTCCAAACTTGAAGAGGAGCTTAAAGTTTCTTCTCGGCTTCGAAAATTCGCATTTAACGATTTGAAGTTGGCAACAAG
AAACTTCAGACCAGAGTCCCTTCTTGGTGAAGGGGGTTTCGGATGTGTCTTCAAGGGGTGGATCGAAGAGAATGGCACAGCACCTGTTAAACCAG
GGACAGGGCTTACTGTTGCTGTGAAAACTCTAAATCATGATGGACTTCAGGGTCACAAAGAATGGCTGGCTGAAGTGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E307407] | SGN-U584937 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T119116 [Download] [View] | Facility Assigned ID: TRYBT33TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0031 | Quality Trim Threshold: 14.5 |
Working
