EST details — SGN-E307648
| Search information |
| Request: 307648 | Match: SGN-E307648 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C96603 | Clone name: cLEY-16-L3 |
| ||
| Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192961 [TUS-66-P15] | Trace: SGN-T345447 | EST: SGN-E544572 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192961 [TUS-66-P15] | Trace: SGN-T345448 | EST: SGN-E544573 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E307648 | Length: 616 bp (1046 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E307648 [] (trimmed)
GCTCCTCTTCCAAAAACCCTCTCAGGCTGGTGCAAAACATGTTTATGCCATAGAGGCATCTGAAATGGCCGAACATGCTAAAAAGCTTATTGCAG
GAAATCCATCATTGAATGAGAGAATTACAGTAATCAAAGGAAAGGTTGAAGAAGTAGAGTTACCTGTGAAAGCCGATATCTTAATCTCTGAGCCA
ATGGGTACTTTGTTAGTTAATGAAAGAATGCTGGAGTCTTATGTGATTGCAAGAGATCGGTTTCTAGTTCCAAATGGAAAAATGTTTCCTGCAGT
GGGAAGAATACACGTGGCACCATTCAGTGATGAATATTTGTATCTGGAAATTGCAAATAAGGCTATTTTTTGGCAGCAACAGAGCTATTTTGGGG
TTGATTTAACACCCTTGCAAAGATCTGCATATGAAGGATACTTTTCTCAGCCAGTGGTTGATGCTTTTGATCCAAGGTTATTGGTAGCTCCTGCA
ATATCTCATGCGATTAACTTCACTTTAATAAAGGAAGAAGATCTATATGAAATTGAGATCCCATTGAAATTTGCATGTTCTGTTAGCACTAGAAT
TCATGGGCTGGCTTGCTGGTTTGATGTACTATTCAATGGAAGCACT
GAAATCCATCATTGAATGAGAGAATTACAGTAATCAAAGGAAAGGTTGAAGAAGTAGAGTTACCTGTGAAAGCCGATATCTTAATCTCTGAGCCA
ATGGGTACTTTGTTAGTTAATGAAAGAATGCTGGAGTCTTATGTGATTGCAAGAGATCGGTTTCTAGTTCCAAATGGAAAAATGTTTCCTGCAGT
GGGAAGAATACACGTGGCACCATTCAGTGATGAATATTTGTATCTGGAAATTGCAAATAAGGCTATTTTTTGGCAGCAACAGAGCTATTTTGGGG
TTGATTTAACACCCTTGCAAAGATCTGCATATGAAGGATACTTTTCTCAGCCAGTGGTTGATGCTTTTGATCCAAGGTTATTGGTAGCTCCTGCA
ATATCTCATGCGATTAACTTCACTTTAATAAAGGAAGAAGATCTATATGAAATTGAGATCCCATTGAAATTTGCATGTTCTGTTAGCACTAGAAT
TCATGGGCTGGCTTGCTGGTTTGATGTACTATTCAATGGAAGCACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E307648] | SGN-U567451 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T120002 [Download] [View] | Facility Assigned ID: TRYCK62TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.957 | Expected Error Rate: 0.0061 | Quality Trim Threshold: 14.5 |
Working
