EST details — SGN-E307778
Search information |
Request: 307778 | Match: SGN-E307778 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C96547 | Clone name: cLEY-16-H8 |
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Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E307778 | Length: 656 bp (829 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E307778 [] (trimmed)
GGTGAAATCAACCATTTCCTTTCCCAAAACGAAAGTTCCAGATCAGACTCGGAGAATCGGCTAAGGGAAAAAGAAAAAGGAGAGTGAAATCAGCA
CTGGTTGATGAAGCTGCCGTTGCCTGGTGAGCTCCGATTACGAGTTCGAATTCCGACCTAACCGGGATAGTCGTTTCCTGATTTGATGATCCGAT
AGGCCTGAACAGTAAGATCCGAGAAGCTGAATTGGCGGGTTCTGAACAACCTGGTGCTTCTACACGTCCGAAGTGATCTGGCCCCTACCTAAATT
AAGAGCTTTTTGGCAAATGGCTAGTTCTGGCTCCTCCCGTGCTGACTTGAAAAAGATGGAAGATGAGTTCAGAGCTTACGAGATGAGCCTCATGA
ATCCTCCCTCTTCCATCGATGACCTGTTCAAAATTCTTCAGAAAGTTGAGTCATCACTGAAAATGGTTAGTCAAGAACCATTTGATTCGACAATA
AGTGCAATTCAACCTTTAATGAAAGCACTGGTTAGGAATGAACTATTGGGGCATACAAGTGAAGATGTCAAAGTGTCAGTGATTTCTTCTGTCAC
TGAAATTTCTCGAATATATGCCCCAAATCGCCCTTACGATGATGATAGACAAATGGAGGAAATTCTCCGGCAAACCGTAATGACTT
CTGGTTGATGAAGCTGCCGTTGCCTGGTGAGCTCCGATTACGAGTTCGAATTCCGACCTAACCGGGATAGTCGTTTCCTGATTTGATGATCCGAT
AGGCCTGAACAGTAAGATCCGAGAAGCTGAATTGGCGGGTTCTGAACAACCTGGTGCTTCTACACGTCCGAAGTGATCTGGCCCCTACCTAAATT
AAGAGCTTTTTGGCAAATGGCTAGTTCTGGCTCCTCCCGTGCTGACTTGAAAAAGATGGAAGATGAGTTCAGAGCTTACGAGATGAGCCTCATGA
ATCCTCCCTCTTCCATCGATGACCTGTTCAAAATTCTTCAGAAAGTTGAGTCATCACTGAAAATGGTTAGTCAAGAACCATTTGATTCGACAATA
AGTGCAATTCAACCTTTAATGAAAGCACTGGTTAGGAATGAACTATTGGGGCATACAAGTGAAGATGTCAAAGTGTCAGTGATTTCTTCTGTCAC
TGAAATTTCTCGAATATATGCCCCAAATCGCCCTTACGATGATGATAGACAAATGGAGGAAATTCTCCGGCAAACCGTAATGACTT
Unigenes |
Current Unigene builds | |||||
[SGN-E307778] | SGN-U576284 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T120132 [Download] [View] | Facility Assigned ID: TRYCL40TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.973 | Expected Error Rate: 0.0108 | Quality Trim Threshold: 14.5 |