EST details — SGN-E307898
| Search information |
| Request: 307898 | Match: SGN-E307898 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C97318 | Clone name: cLEY-20-O6 |
| ||
| Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E307898 | Length: 393 bp (989 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E307898 [] (trimmed)
AATGGCCTAATATGAAATATCATATATACAAGTCACAAGCATGGTCTACTGTATTCCCCTTAAAACATGCTACTGCAATAAGTTTCTAAGTTCGG
GCATAAATCTGACTCCACAGTGGAGTCACCAGAAAATTTAATTGGCAACAAAATGGTATCTTGAGTCGACATAACTCTCAACATCCCAGAGGAAA
GACCCAAAAGTTACAGCCTCCAAAACAAGCCGCCTCAGCCCACCAAAACTGATCTTAATAAGTTCATCTTTAGATGAGTCAATAGTGCCTTGAGG
GGTGATAACAATCTCAGGTCTACCAAATAGTGCTTCGGTGTGTTTCTCAATCATGCCTATGGCCTCTCGAGATCTGATGGGTGCATATCTTTGGA
AGGTCTCCCCTTC
GCATAAATCTGACTCCACAGTGGAGTCACCAGAAAATTTAATTGGCAACAAAATGGTATCTTGAGTCGACATAACTCTCAACATCCCAGAGGAAA
GACCCAAAAGTTACAGCCTCCAAAACAAGCCGCCTCAGCCCACCAAAACTGATCTTAATAAGTTCATCTTTAGATGAGTCAATAGTGCCTTGAGG
GGTGATAACAATCTCAGGTCTACCAAATAGTGCTTCGGTGTGTTTCTCAATCATGCCTATGGCCTCTCGAGATCTGATGGGTGCATATCTTTGGA
AGGTCTCCCCTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E307898] | SGN-U568023 | Tomato 200607 | Build 2 | 77 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T120708 [Download] [View] | Facility Assigned ID: TRYCZ87TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.964 | Expected Error Rate: 0.0078 | Quality Trim Threshold: 14.5 |
Working
