EST details — SGN-E308142
| Search information |
| Request: 308142 | Match: SGN-E308142 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C95967 | Clone name: cLEY-14-A14 |
| ||
| Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C192850 [TUS-66-K24] | Trace: SGN-T345256 | EST: SGN-E544381 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C192850 [TUS-66-K24] | Trace: SGN-T345257 | EST: SGN-E544382 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E308142 | Length: 292 bp (936 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E308142 [] (trimmed)
GGTAGGCTCATATCGAGGCGGCTATCATGGCACATTTACTTTCTACTACATGTTCTTTAAATGTCTCTTCCAGCAAAAAGCTACATTTCAAGTCA
ATTAACCAATGCTCTACTCCTAATCCAACATGTTTTAATATGGGAATTTCTTTCTCACCCTTGAAGCTAAGTTTGCAAAGCAAAAGGTCTGCAAA
ATATGTGATCAGAGCTTCAGCTGGTTTCATGAGCCAAGAAACCCGAACACAGAATGACTCTGGTTCTCAACAAACCACTGATGGAGCATCCACTC
AGAAGAA
ATTAACCAATGCTCTACTCCTAATCCAACATGTTTTAATATGGGAATTTCTTTCTCACCCTTGAAGCTAAGTTTGCAAAGCAAAAGGTCTGCAAA
ATATGTGATCAGAGCTTCAGCTGGTTTCATGAGCCAAGAAACCCGAACACAGAATGACTCTGGTTCTCAACAAACCACTGATGGAGCATCCACTC
AGAAGAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E308142] | SGN-U580292 | Tomato 200607 | Build 2 | 34 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T119825 [Download] [View] | Facility Assigned ID: TRYCB07TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.935 | Expected Error Rate: 0.0124 | Quality Trim Threshold: 14.5 |
Working
