EST details — SGN-E308145
Search information |
Request: 308145 | Match: SGN-E308145 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C95994 | Clone name: cLEY-14-C14 |
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Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
This clone has been mapped as cLEY-14-C14.
Additional sequencing |
Clone: SGN-C192854 [TUS-66-L4] | Trace: SGN-T345263 | EST: SGN-E544388 | Direction: 3' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E308145 | Length: 512 bp (953 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E308145 [] (trimmed)
GGAGCTGCCAAAGTTGGAAATGTTGAATCTTTGGAGGAATAATTTCACTGGCTCGATTCCTTCTAAGCTTGGGATGAACGGTAAACTAATTGAAA
TTGATCTGTCTAGTAATAGACTCACTGGCTTGATACCAAAATCTCTATGCTTTGGGAGGAATTTGAAAATCTTGATTCTTCTTGATAATTTTCTG
TTTGGACCTTTACCTGATGATTTTGGGCAGTGTCGAACGTTGTCCAGAGTCAGAATGGGACAGAATTACTTGAGTGGATCAATACCAACAGGGTT
TCTTTATTTGCCTGAGTTGTCACTGGTGGAACTGCAGAACAACTACATCAGTGGACAACTCTGGAACGAGAAAAGCTCAGCGTCTTCTAAACTTG
AAGGGCTGAACCTGTCGAACAATCGCTTGTCTGGTGCACTTCCTAGTGCTATTGGAAACTATTCAGGGCTGAAGAATCTTGTGTTAACTGGAAAT
GGTTTCTCAGGTGATATCCCTTCTGATATTGGCAGAC
TTGATCTGTCTAGTAATAGACTCACTGGCTTGATACCAAAATCTCTATGCTTTGGGAGGAATTTGAAAATCTTGATTCTTCTTGATAATTTTCTG
TTTGGACCTTTACCTGATGATTTTGGGCAGTGTCGAACGTTGTCCAGAGTCAGAATGGGACAGAATTACTTGAGTGGATCAATACCAACAGGGTT
TCTTTATTTGCCTGAGTTGTCACTGGTGGAACTGCAGAACAACTACATCAGTGGACAACTCTGGAACGAGAAAAGCTCAGCGTCTTCTAAACTTG
AAGGGCTGAACCTGTCGAACAATCGCTTGTCTGGTGCACTTCCTAGTGCTATTGGAAACTATTCAGGGCTGAAGAATCTTGTGTTAACTGGAAAT
GGTTTCTCAGGTGATATCCCTTCTGATATTGGCAGAC
Unigenes |
Current Unigene builds | |||||
[SGN-E308145] | SGN-U604508 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T119828 [Download] [View] | Facility Assigned ID: TRYCB19TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.953 | Expected Error Rate: 0.0053 | Quality Trim Threshold: 14.5 |