EST details — SGN-E308982
| Search information |
| Request: 308982 | Match: SGN-E308982 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C97808 | Clone name: cLEY-23-H15 |
| ||
| Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193201 [TUS-67-J15] | Trace: SGN-T345859 | EST: SGN-E544984 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193201 [TUS-67-J15] | Trace: SGN-T345860 | EST: SGN-E544985 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E308982 | Length: 546 bp (1023 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E308982 [] (trimmed)
GGCAGAATCCTATGTTTGATCATAGACAAGTAACAGAAAAGGCAGCTGCTGGCGTCAGAGTCTCAGACCCGAAGGTTTTGCGACCACCACCTCGA
GTACCCACAGCCAAACCTGGAAGAGTTTTAGGACCAGTATATGATGGTGACAGAAGCATCAAAGAAGTCACTGATGGAAGAGTATATGCCCAGAA
CTCTGTCGTCCAACCTCATGGCATGTCTCCACAATATCTGTTCAGGAGTAACTCTACACATCTAGAGAAGTGTGGGACAGAAGCAGAGAAGGACC
GCTCTCAAGTTAAACAGCAACATGGCCAGTGCATGGTTGCCAAGTCGTCCGCTAGTATGAGTTTTGAGATGAACACTAACCCATATTACCATACA
CAGGCAAGGGTAGCACAGTTGGGAGGTCAAATCGCCATGGATGCAAAATTACTACAGGCACAAACACAGTTTGGTGCAGTCGGTGCTGCAGCTTG
CGCTGTTGCTGCTCACAGAGAGGTCGGCACCCGTCAGTATGGTCTATAACCTAGTCGATACTATTGTTTGA
GTACCCACAGCCAAACCTGGAAGAGTTTTAGGACCAGTATATGATGGTGACAGAAGCATCAAAGAAGTCACTGATGGAAGAGTATATGCCCAGAA
CTCTGTCGTCCAACCTCATGGCATGTCTCCACAATATCTGTTCAGGAGTAACTCTACACATCTAGAGAAGTGTGGGACAGAAGCAGAGAAGGACC
GCTCTCAAGTTAAACAGCAACATGGCCAGTGCATGGTTGCCAAGTCGTCCGCTAGTATGAGTTTTGAGATGAACACTAACCCATATTACCATACA
CAGGCAAGGGTAGCACAGTTGGGAGGTCAAATCGCCATGGATGCAAAATTACTACAGGCACAAACACAGTTTGGTGCAGTCGGTGCTGCAGCTTG
CGCTGTTGCTGCTCACAGAGAGGTCGGCACCCGTCAGTATGGTCTATAACCTAGTCGATACTATTGTTTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E308982] | SGN-U566587 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T121275 [Download] [View] | Facility Assigned ID: TRYDM44TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0115 | Quality Trim Threshold: 14.5 |
Working
