EST details — SGN-E309719
Search information |
Request: 309719 | Match: SGN-E309719 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C98249 | Clone name: cLEY-26-M24 |
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Library Name: cLEY | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: pre-anthesis/pre-fruit loading
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E309719 | Length: 549 bp (1055 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E309719 [] (trimmed)
CGAGAGCCTGAAGTAGAGCGGCGTTCAATTTTGGCTACCGAATCTCTTCAAAGGAGAGGGCCTTCAGTGAGGGAGCCTTACCTTGCTTGGTACCA
GCTGTAAAACATGAATCCAAATGAATCTGCAAAGTCTCATGCCCAAACCCGATATCATTCTGACCTGGGACCTGCAAAAACATGTCCAATTGGAC
CCGCCACCTTGGTTTGGTTGACCATAGGCCAGTAGTGATAATGCATATATTTTTCGTGTTGCGCCTTCCTGGTGTAAGGCATAAATGTAATATCC
AATTTGACATACCAGAGAGAAGGGAGAGTCCGGATAGAAGGTGTGATTACCAGAGAGTGAGGCTTTGAAAAACTCACTCAAGGGTTATGAGATGA
AAGTTCAGCAGCTTCCTTCCCCTGGGCCTTTTACCATATCGTTCAATTTGCCAGGACCTGTTGATCCCAGATTATGTTCCCCGCAGTTTAGAACC
GATGGCATTTTGGAAGTCATTGTGATGAAATATCAGATACCTTTGGTTTCAGCAGAAGGTTTGCCTGAGAATTG
GCTGTAAAACATGAATCCAAATGAATCTGCAAAGTCTCATGCCCAAACCCGATATCATTCTGACCTGGGACCTGCAAAAACATGTCCAATTGGAC
CCGCCACCTTGGTTTGGTTGACCATAGGCCAGTAGTGATAATGCATATATTTTTCGTGTTGCGCCTTCCTGGTGTAAGGCATAAATGTAATATCC
AATTTGACATACCAGAGAGAAGGGAGAGTCCGGATAGAAGGTGTGATTACCAGAGAGTGAGGCTTTGAAAAACTCACTCAAGGGTTATGAGATGA
AAGTTCAGCAGCTTCCTTCCCCTGGGCCTTTTACCATATCGTTCAATTTGCCAGGACCTGTTGATCCCAGATTATGTTCCCCGCAGTTTAGAACC
GATGGCATTTTGGAAGTCATTGTGATGAAATATCAGATACCTTTGGTTTCAGCAGAAGGTTTGCCTGAGAATTG
Unigenes |
Current Unigene builds | |||||
[SGN-E309719] | SGN-U578542 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T121537 [Download] [View] | Facility Assigned ID: TRYDX84TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.979 | Expected Error Rate: 0.0085 | Quality Trim Threshold: 14.5 |