EST details — SGN-E309813
Search information |
Request: 309813 | Match: SGN-E309813 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C98578 | Clone name: cLEZ-10-K23 |
| ||
Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E309813 | Length: 454 bp (987 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E309813 [] (trimmed)
GCACGTGGCACCATTCAGTGATGAATATTTGTATCTGGAAATTGCAAATAAGGCTATTTTTTGGCAGCAACAGAGCTATTTTGGGGTTGATTTAA
CACCCTTGCAAAGATCTGCATATGAAGGATACTTTTCTCAGCCAGTGGTTGATGCTTTTGATCCAAGGTTATTGGTAGCTCCTGCAATATCTCAT
GCGATTAACTTCACTTTAATAAAGGAAGAAGATCTATATGAAATTGAGATCCCATTGAAATTTGCATGTTCTGTTAGCACTAGAATTCATGGGCT
GGCTTGCTGGTTTGATGTACTATTCAATGGAAGCACTGTACCGAGGTGGCTTACCACTGCTCCTGGTGCACCTACAACTCACTGGTATCAGCTTC
CGTGTGTATTGTCACAGCCCCTTTATGTCATGCCAGGACAAGAGATAACTGGCAACTTTCGCCTGGTTGCCCAT
CACCCTTGCAAAGATCTGCATATGAAGGATACTTTTCTCAGCCAGTGGTTGATGCTTTTGATCCAAGGTTATTGGTAGCTCCTGCAATATCTCAT
GCGATTAACTTCACTTTAATAAAGGAAGAAGATCTATATGAAATTGAGATCCCATTGAAATTTGCATGTTCTGTTAGCACTAGAATTCATGGGCT
GGCTTGCTGGTTTGATGTACTATTCAATGGAAGCACTGTACCGAGGTGGCTTACCACTGCTCCTGGTGCACCTACAACTCACTGGTATCAGCTTC
CGTGTGTATTGTCACAGCCCCTTTATGTCATGCCAGGACAAGAGATAACTGGCAACTTTCGCCTGGTTGCCCAT
Unigenes |
Current Unigene builds | |||||
[SGN-E309813] | SGN-U567451 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T122483 [Download] [View] | Facility Assigned ID: TRZBK72TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.972 | Expected Error Rate: 0.0104 | Quality Trim Threshold: 14.5 |