EST details — SGN-E310060
| Search information |
| Request: 310060 | Match: SGN-E310060 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C100420 | Clone name: cLEZ-8-C24 |
| ||
| Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193327 [TUS-67-O21] | Trace: SGN-T346076 | EST: SGN-E545201 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193327 [TUS-67-O21] | Trace: SGN-T346077 | EST: SGN-E545202 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E310060 | Length: 599 bp (918 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E310060 [] (trimmed)
TTGAACAAATATTATTTAGAGAAATAAAGTGAGAATTATGAAAATGAATATAGTTTTTATAGCCTCATTAATTTTGGTGTTTTCTAATTTTATTG
AAGCCTCAGATGGAATGGATGTTATGCATATTTCTGGCAAAGTTCTTTGCCAAGATTGTACTCAAGGATGGAATGAATGGGTTGATGGTGCCAAA
GCCATCAAAGGTAGCATCGTATCTCTGACGTGCCTGGACGAGAGAAGAAGAGTGATGTATTACGGAAGTGACCTCACAGATGAAGCTGGAATTTT
CGATTTGATTGTTAACCAAACTTGTCATGGCAAAACAATTAAGCCACAAAATTGCTTTGTGAGATTGGTTTCTTCACCTGATCCTGTTTGTAATA
TTGCCACCGACTTCGCCGGAGGAAAATCCGGTGTAAAGCTCCACCGTCCGACGGTGGTTTACCGGGACTTGCTCAAATATGTGCTTAGCCCTTTC
TACTACACAACTCCCATGTGTGATGAACCTAATATTAATGATGATGATAATTTGGAGACTAATGATGATAAAAATCAAAACAATTATTAAATTAA
GTTCTTATTTTTAATTTTTTCTTCTTCTA
AAGCCTCAGATGGAATGGATGTTATGCATATTTCTGGCAAAGTTCTTTGCCAAGATTGTACTCAAGGATGGAATGAATGGGTTGATGGTGCCAAA
GCCATCAAAGGTAGCATCGTATCTCTGACGTGCCTGGACGAGAGAAGAAGAGTGATGTATTACGGAAGTGACCTCACAGATGAAGCTGGAATTTT
CGATTTGATTGTTAACCAAACTTGTCATGGCAAAACAATTAAGCCACAAAATTGCTTTGTGAGATTGGTTTCTTCACCTGATCCTGTTTGTAATA
TTGCCACCGACTTCGCCGGAGGAAAATCCGGTGTAAAGCTCCACCGTCCGACGGTGGTTTACCGGGACTTGCTCAAATATGTGCTTAGCCCTTTC
TACTACACAACTCCCATGTGTGATGAACCTAATATTAATGATGATGATAATTTGGAGACTAATGATGATAAAAATCAAAACAATTATTAAATTAA
GTTCTTATTTTTAATTTTTTCTTCTTCTA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E310060] | SGN-U582347 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T122026 [Download] [View] | Facility Assigned ID: TRZBD24TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0036 | Quality Trim Threshold: 12.5 |
Working
