EST details — SGN-E310521
Search information |
Request: 310521 | Match: SGN-E310521 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C99773 | Clone name: cLEZ-19-E17 |
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Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E310521 | Length: 391 bp (880 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E310521 [] (trimmed)
GCTTCAGGAGCCATGGCGAAACGTTAGATCCCAACACTTAACAGGGTTTTGATCGAGAAAATTACAGATCCTGCTAAAACAAGTGCTGGTATTCT
TCTTCCTGAGAATTCATCTAAGCTGAATTCAAGGAAAGTAGTGGCTGTTGGACCAGGACTTCATGACAAGACAGGGAACTTGATACCTACTGCTG
TCAAGGAAGGTGACACCGTCTTGTTGCCTGAGTACGGTGGTACTCAAGTCAAGTTGGGGGAAAAAGAATTTGATTTGTACCGGGATGAAGACATT
TTAGGGACACTGCACGACTGAGCACCACCGCGTTTGAGTTCTCATTGACGTTCATGTTGTTGAGGGTTATATTCAATGGGAGGTTAATATCAAGG
ATGTTTTTGGT
TCTTCCTGAGAATTCATCTAAGCTGAATTCAAGGAAAGTAGTGGCTGTTGGACCAGGACTTCATGACAAGACAGGGAACTTGATACCTACTGCTG
TCAAGGAAGGTGACACCGTCTTGTTGCCTGAGTACGGTGGTACTCAAGTCAAGTTGGGGGAAAAAGAATTTGATTTGTACCGGGATGAAGACATT
TTAGGGACACTGCACGACTGAGCACCACCGCGTTTGAGTTCTCATTGACGTTCATGTTGTTGAGGGTTATATTCAATGGGAGGTTAATATCAAGG
ATGTTTTTGGT
Unigenes |
Current Unigene builds | |||||
[SGN-E310521] | SGN-U579891 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T123722 [Download] [View] | Facility Assigned ID: TRZCU33TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.973 | Expected Error Rate: 0.0336 | Quality Trim Threshold: 12.5 |