EST details — SGN-E310710
Search information |
Request: 310710 | Match: SGN-E310710 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C99071 | Clone name: cLEZ-15-M17 |
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Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C193483 [TUS-68-F9] | Trace: SGN-T346344 | EST: SGN-E545469 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C193483 [TUS-68-F9] | Trace: SGN-T346345 | EST: SGN-E545470 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E310710 | Length: 465 bp (1109 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E310710 [] (trimmed)
GAATTGCTGTTATTTCACTATATATTCTCTAATTAATCTCTTTTTTTTTGTTTAATTTTTTGCTTAACAATGACTACTATTCCGGTTATTGATTT
TTCAAAACTTTATGGAGAGGAAAGAGCCCAAACTTTGGCTCAAATTTCCAAAGGTTGTGAAGAATGGGGATTCTTTCAGTTGGTGAATCATGGGA
TACCAGTGGAGTTATTAGAAAGGGTGAAGAAAGTTGGTGAAGAATGCTTTAAGTTGGAAAGAGAAGAAGTGTTCAACAAGTCAAGAGTAGTGAAT
TTGCTTAATGAATTTGTGGAAAGCAATAAAAATGGCAAAGTTGAAAATGTGGATTGGGAAGATGTATTCCTTCTAACTGATGATAATTGTAATCA
ATGGCCCTCCAAAACTTCTCAATTCAAGGAAACAATGAAAGAGTATAGATCAGAGGTGAAAAAGCTAGCAGAAAGAGTGATGGAA
TTCAAAACTTTATGGAGAGGAAAGAGCCCAAACTTTGGCTCAAATTTCCAAAGGTTGTGAAGAATGGGGATTCTTTCAGTTGGTGAATCATGGGA
TACCAGTGGAGTTATTAGAAAGGGTGAAGAAAGTTGGTGAAGAATGCTTTAAGTTGGAAAGAGAAGAAGTGTTCAACAAGTCAAGAGTAGTGAAT
TTGCTTAATGAATTTGTGGAAAGCAATAAAAATGGCAAAGTTGAAAATGTGGATTGGGAAGATGTATTCCTTCTAACTGATGATAATTGTAATCA
ATGGCCCTCCAAAACTTCTCAATTCAAGGAAACAATGAAAGAGTATAGATCAGAGGTGAAAAAGCTAGCAGAAAGAGTGATGGAA
Unigenes |
Current Unigene builds | |||||
[SGN-E310710] | SGN-U568205 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T122925 [Download] [View] | Facility Assigned ID: TRZCE81TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.923 | Expected Error Rate: 0.0129 | Quality Trim Threshold: 14.5 |