EST details — SGN-E310725

Search information 
Request: 310725Match: SGN-E310725
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C98979Clone name: cLEZ-15-E8
cartOrder Clone
Library Name: cLEZOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: root
Development Stage: germinating seedlings

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C193474 [TUS-68-E24] Trace: SGN-T346329 EST: SGN-E545454 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E310725Length: 558 bp (967 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E310725 [] (trimmed) CAACGCCTTCTCCACCACCTCCCTACTACTATCACTGTCCACCTGCACCCGTAAGGCCTGGTACTCCTCCTTATTACTACAGCTCGCCTCCTCCA
CCGGTAAAATCGCCTCCTGCCCCGGCGTACATTTACGCTTCACCACCACCACCAGTCCACTACTAAAAGTTTCTAAGAGTGCAGTCATTCTCCAC
AATCAATCAAATTTTAGTTTGAAACACAAAATAAATGATGGCTTCTTGAGGAATAGATTCAAACGTCAATGGTTCAAAGCAATTAATTTATGGAA
TAACATTTTCAATCTTTTAATTGAAGGGTTGATTCTTCATGACATGGACATATTGGATTCTACTTCTCTTTTGTCCTTCTTGCACATTGATCTCT
TAGTGCGTGCACATGAACGTATCTAGGCTTTGATGCTTCTTAGAGTTTGTTTCTTTGTAACTTATTATTTGTATTGGGATATTGCCCTCTGTTAT
TCATTCTTATGAATTATTACTGAATGTTGTTCTCGTAACACCTTTATGTACTTTGTGCATTAATCAATAAGAAGATCAATTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E310725] SGN-U580104 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T122940 [Download] [View] Facility Assigned ID: TRZCF28TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0184 Quality Trim Threshold: 14.5