EST details — SGN-E310769
| Search information |
| Request: 310769 | Match: SGN-E310769 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C99067 | Clone name: cLEZ-15-L9 |
| ||
| Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: Alias clone SGN-C183325 is on microarray TOM1: SGN-S1-1-6.3.3.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183325 [TUS-41-O3] | Trace: SGN-T191519 | EST: SGN-E390193 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183325 [TUS-41-O3] | Trace: SGN-T191726 | EST: SGN-E390400 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E310769 | Length: 553 bp (881 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E310769 [] (trimmed)
AGAAAAAATACAAGACTGTACAGAAAATATAGTATATAGAAATAATAGGAATAGGAACAAAAAATCCCCCAACTCCAAAGAAGAAGAAGGAGGAG
TTGTTTGTACCTTGGATCTCCAGCCATGATTCATTTTGTTCTGCTCATTAGCCGACAGGGAAAGGTGAGGCTAACCAAGTGGTATTCACCATATT
CACAAAAAGAGAGAACCAAGGTAATCCGTGAATTAAGTGGTATGATTCTCACTCGAGGACCGAAGCTTTGCAATTTTGTCGAGTGGAGAGGATAC
AAAGTCGTTTATAAAAGATATGCAAGCCTGTATTTCTGTATGTGCATAGACCAAGAGGACAATGAGTTGGAGGTCCTGGAAATCATACACCATTT
TGTTGAGATTCTGGACCGATACTTTGGAAGTGTATGTGAGCTAGACTTAATTTTCAATTTTCACAAGGCATACTATATATTGGACGAACTTGTGA
TTGCTGGTGAACTCCAAGAATCAAGCAAGAAAACAGTTGCACGTCTAATTGCTGCACAGGATTCTTTGGTTGAGGCTG
TTGTTTGTACCTTGGATCTCCAGCCATGATTCATTTTGTTCTGCTCATTAGCCGACAGGGAAAGGTGAGGCTAACCAAGTGGTATTCACCATATT
CACAAAAAGAGAGAACCAAGGTAATCCGTGAATTAAGTGGTATGATTCTCACTCGAGGACCGAAGCTTTGCAATTTTGTCGAGTGGAGAGGATAC
AAAGTCGTTTATAAAAGATATGCAAGCCTGTATTTCTGTATGTGCATAGACCAAGAGGACAATGAGTTGGAGGTCCTGGAAATCATACACCATTT
TGTTGAGATTCTGGACCGATACTTTGGAAGTGTATGTGAGCTAGACTTAATTTTCAATTTTCACAAGGCATACTATATATTGGACGAACTTGTGA
TTGCTGGTGAACTCCAAGAATCAAGCAAGAAAACAGTTGCACGTCTAATTGCTGCACAGGATTCTTTGGTTGAGGCTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E310769] | SGN-U572102 | Tomato 200607 | Build 2 | 25 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T122984 [Download] [View] | Facility Assigned ID: TRZCG65TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0048 | Quality Trim Threshold: 14.5 |
Working
