EST details — SGN-E311029
Search information |
Request: 311029 | Match: SGN-E311029 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C99416 | Clone name: cLEZ-17-H3 |
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Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C193531 [TUS-68-H9] | Trace: SGN-T346426 | EST: SGN-E545551 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C193531 [TUS-68-H9] | Trace: SGN-T346427 | EST: SGN-E545552 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E311029 | Length: 551 bp (847 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E311029 [] (trimmed)
TGTAGAAGGCTTTCTCAGTTCTTAAGAGCTCTCTGTTTTCTCCTTCCTTCGTGTATACACACACCATTTTGTGTTTTTGTTTTTGAAACAATGAC
GGTCCAAAAGGCATTCGTTGCAATGCTTATTGCATCCTTTCTACTAGTCCATTTCGCTAATGCTCAAAAGGTTGACTACAGCAAGCCACCAGCAT
CAGCCCCTCAAGGTCCACAGCCACTAGATTGCATAGGAGCTTGTAAATATCGGTGCAGTGAGTCGTCCAGGCAAAATCTATGCAACAGAGCATGT
GGAAGCTGCTGCCATAGATGCCACTGTGTGCCACCAGGGACTTCTGGAAATTATGAATCATGCCCTTGCTATTTCAATCTTACGACTCATAACAC
CACCCGCAAATGCCCTTAATCCCTTTTTCTTAGTTTTTAAATTTGTTCCCCAAAGGAAGTCCATTTTCAAAAAAAAAAACAGAGTGTAACTTTCA
ATTCAATTCAATGTTCCTTCTGTTTACGAAGCTTGTGATGATGCAATAATACATAAGTATTTATAACTTTGTTCAT
GGTCCAAAAGGCATTCGTTGCAATGCTTATTGCATCCTTTCTACTAGTCCATTTCGCTAATGCTCAAAAGGTTGACTACAGCAAGCCACCAGCAT
CAGCCCCTCAAGGTCCACAGCCACTAGATTGCATAGGAGCTTGTAAATATCGGTGCAGTGAGTCGTCCAGGCAAAATCTATGCAACAGAGCATGT
GGAAGCTGCTGCCATAGATGCCACTGTGTGCCACCAGGGACTTCTGGAAATTATGAATCATGCCCTTGCTATTTCAATCTTACGACTCATAACAC
CACCCGCAAATGCCCTTAATCCCTTTTTCTTAGTTTTTAAATTTGTTCCCCAAAGGAAGTCCATTTTCAAAAAAAAAAACAGAGTGTAACTTTCA
ATTCAATTCAATGTTCCTTCTGTTTACGAAGCTTGTGATGATGCAATAATACATAAGTATTTATAACTTTGTTCAT
Unigenes |
Current Unigene builds | |||||
[SGN-E311029] | SGN-U581603 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T123454 [Download] [View] | Facility Assigned ID: TRZCO38THB |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.966 | Expected Error Rate: 0.0023 | Quality Trim Threshold: 12.5 |