EST details — SGN-E311292
| Search information |
| Request: 311292 | Match: SGN-E311292 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C99259 | Clone name: cLEZ-16-L18 |
| ||
| Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193509 [TUS-68-G11] | Trace: SGN-T346389 | EST: SGN-E545514 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E311292 | Length: 693 bp (825 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E311292 [] (trimmed)
GTGCACTTCTTCAACATTTTTTCTCTTTTCATTTTTGTGTCTTTCCTCTTTTTGTTAATTAAATATTGGAAGAATTCCAATGACCAAATTAGAAA
AAAATTGCCTCCTGGTCCATGGAAATTACCCTTACTTGGAAACATATTTCATTTGTTAGGTGGACCTCCACATCGTGTCCTTAGAGATTTAGCTA
AAAAATATGGTTCTATTATGCACCTTCAATTAGGTGAAGTCTCTCTAGTTGTTGTTACTTCTCCAGACATGGCCAAACAAGTACTAAAAACTCAT
GACATCGCTTTTGCATCTAGGCCAATGCTTATAGCCGCCGAGATAGTTTGTTATAATGGGAGCGACATTGTTTTTTCTCCTTATGGTGATTACTG
GAGACAAATGCGTAAAATTTGCATCATGGAATTGCTTAGTGCCAAAAATGTCAAGTCATTCAGCTCTATTAGGCAAGATGAAGTTCTTCGTATGA
TTGAATTTTTTCGATCATCTTCTGGTGAGACAGTTAATGCAACAAGAAGGATCTTTCAATTCGCGAGCTCTATGACTTGTAGATCAGCTTTTGGG
AAAGTATTCAAAGAGCAAGACGAACTTATACAATTGGTCAAAAAGGTGTCACGCTTAACGGAAGGATTTGATGTCGCTGATATATTCCCATCACT
AAAATTTCTTCATGTGTTATGTGGAATG
AAAATTGCCTCCTGGTCCATGGAAATTACCCTTACTTGGAAACATATTTCATTTGTTAGGTGGACCTCCACATCGTGTCCTTAGAGATTTAGCTA
AAAAATATGGTTCTATTATGCACCTTCAATTAGGTGAAGTCTCTCTAGTTGTTGTTACTTCTCCAGACATGGCCAAACAAGTACTAAAAACTCAT
GACATCGCTTTTGCATCTAGGCCAATGCTTATAGCCGCCGAGATAGTTTGTTATAATGGGAGCGACATTGTTTTTTCTCCTTATGGTGATTACTG
GAGACAAATGCGTAAAATTTGCATCATGGAATTGCTTAGTGCCAAAAATGTCAAGTCATTCAGCTCTATTAGGCAAGATGAAGTTCTTCGTATGA
TTGAATTTTTTCGATCATCTTCTGGTGAGACAGTTAATGCAACAAGAAGGATCTTTCAATTCGCGAGCTCTATGACTTGTAGATCAGCTTTTGGG
AAAGTATTCAAAGAGCAAGACGAACTTATACAATTGGTCAAAAAGGTGTCACGCTTAACGGAAGGATTTGATGTCGCTGATATATTCCCATCACT
AAAATTTCTTCATGTGTTATGTGGAATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E311292] | SGN-U576020 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T123294 [Download] [View] | Facility Assigned ID: TRZCL69TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.961 | Expected Error Rate: 0.0031 | Quality Trim Threshold: 14.5 |
Working
