EST details — SGN-E311345
| Search information |
| Request: 311345 | Match: SGN-E311345 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C99595 | Clone name: cLEZ-18-G10 |
| ||
| Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193565 [TUS-68-I19] | Trace: SGN-T346485 | EST: SGN-E545610 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193565 [TUS-68-I19] | Trace: SGN-T350110 | EST: SGN-E549235 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E311345 | Length: 543 bp (973 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E311345 [] (trimmed)
GCTTCCTTACATCTTTCTTTTTCTCTCTCTCTCTCTTTTCTTTGCATATTAGCAAGAAAAAATAATATAATCAACAAGCTTCACTTAACATATTC
AACTTTAAAAAAATCACAAACTTTGCCCTTTTTGTTTTTTTTTTTGGTTTTCCAGCATTGCAAGTATCACATGGGGAGGCATTCTTGTTGCTACA
AACAGAAGTTAAGGAAAGGCCTTTGGTCTCCTGAAGAAGATGAGAAACTTATAAAGCATATTACTAAATTTGGTCATGGCTGTTGGAGCTCTGTC
CCTAAACTAGCAGGTCTCCAGAGGTGTGGAAAAAGTTGTAGACTGAGGTGGATTAACTACTTGAGGCCTGATTTGAAAAGAGGAACATTCTCACA
GGATGAAGAAAATTTGATCATTGAACTTCATGCAGTTCTTGGGAACAAGTGGTCGCAAATTGCAGCTAGATTACCTGGAAGAACAGATAACGAGA
TAAAGAATCTGTGGAACTCTTCAATTAAGAAAAAGCTTAGGCAAAGAGGAATTGATCCTAATACACAC
AACTTTAAAAAAATCACAAACTTTGCCCTTTTTGTTTTTTTTTTTGGTTTTCCAGCATTGCAAGTATCACATGGGGAGGCATTCTTGTTGCTACA
AACAGAAGTTAAGGAAAGGCCTTTGGTCTCCTGAAGAAGATGAGAAACTTATAAAGCATATTACTAAATTTGGTCATGGCTGTTGGAGCTCTGTC
CCTAAACTAGCAGGTCTCCAGAGGTGTGGAAAAAGTTGTAGACTGAGGTGGATTAACTACTTGAGGCCTGATTTGAAAAGAGGAACATTCTCACA
GGATGAAGAAAATTTGATCATTGAACTTCATGCAGTTCTTGGGAACAAGTGGTCGCAAATTGCAGCTAGATTACCTGGAAGAACAGATAACGAGA
TAAAGAATCTGTGGAACTCTTCAATTAAGAAAAAGCTTAGGCAAAGAGGAATTGATCCTAATACACAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E311345] | SGN-U585001 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T123560 [Download] [View] | Facility Assigned ID: TRZCR41TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.935 | Expected Error Rate: 0.0131 | Quality Trim Threshold: 14.5 |
Working
