EST details — SGN-E311688
| Search information |
| Request: 311688 | Match: SGN-E311688 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C100667 | Clone name: cLEZ-9-F2 |
| ||
| Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193367 [TUS-68-A13] | Trace: SGN-T346144 | EST: SGN-E545269 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193367 [TUS-68-A13] | Trace: SGN-T346145 | EST: SGN-E545270 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E311688 | Length: 575 bp (905 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E311688 [] (trimmed)
GAGACACTTGAGAGTTCTCTCTTTATAGAAAATATGGGTTCTGAAAATATGAAGCTTCCAAAAATAGACTTTTCTCATGAAGATCTAAAGCCAGA
CACACTTGTATGGAATCAAGTGAAAAGCCAAGTACACAAAGCATTAGTAGAATATGGTTGTTTTGAAGCTTCCTTTGATAAAATTCCAATACATC
TTAGAAAATCCATTTTTGAATCCTTACAAGAGCTTTTTGATCTTCCTTTACAAACCAAACTTAAAAACATTTCAAAAAAACCATTCCATGGCTAT
GTTGGACAATATCCTCAAGTTCCACTCTATGAAAGTATGGGCATTGATGATGCTAATATTCCTCATAAAGCTGAAAAATTCACTCAAATTCTGTG
GCCTCAAGGAAATCCTACTTTTTGGCATGGGCAAATGGTCGATTGCATTCTCCGTATCATAGAGTAATGATGAGAGGAAATGAAGCAAGGTATTC
AGTTGGATTGTTTTCAATACCTAAAGCTGGATATACAATAAAGGCACCAGAAGAGTTGGTAGATGAAGAACATTCTTTACTCTTTAAGCCCTTTG
ATCAT
CACACTTGTATGGAATCAAGTGAAAAGCCAAGTACACAAAGCATTAGTAGAATATGGTTGTTTTGAAGCTTCCTTTGATAAAATTCCAATACATC
TTAGAAAATCCATTTTTGAATCCTTACAAGAGCTTTTTGATCTTCCTTTACAAACCAAACTTAAAAACATTTCAAAAAAACCATTCCATGGCTAT
GTTGGACAATATCCTCAAGTTCCACTCTATGAAAGTATGGGCATTGATGATGCTAATATTCCTCATAAAGCTGAAAAATTCACTCAAATTCTGTG
GCCTCAAGGAAATCCTACTTTTTGGCATGGGCAAATGGTCGATTGCATTCTCCGTATCATAGAGTAATGATGAGAGGAAATGAAGCAAGGTATTC
AGTTGGATTGTTTTCAATACCTAAAGCTGGATATACAATAAAGGCACCAGAAGAGTTGGTAGATGAAGAACATTCTTTACTCTTTAAGCCCTTTG
ATCAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E311688] | SGN-U575222 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T122293 [Download] [View] | Facility Assigned ID: TRZBJ25TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.943 | Expected Error Rate: 0.0129 | Quality Trim Threshold: 12.5 |
Working
