EST details — SGN-E311768
| Search information |
| Request: 311768 | Match: SGN-E311768 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C100752 | Clone name: cLEZ-9-K2 |
| ||
| Library Name: cLEZ | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: root
Development Stage: germinating seedlings
Microarray: Alias clone SGN-C185232 is on microarray TOM1: SGN-S1-1-3.2.12.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C185232 [TUS-46-N14] | Trace: SGN-T192037 | EST: SGN-E390711 | Direction: 5' | Facility: INRA |
| Clone: SGN-C185232 [TUS-46-N14] | Trace: SGN-T192281 | EST: SGN-E390955 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E311768 | Length: 505 bp (1593 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E311768 [] (trimmed)
GGTTGGGTATTGTAAAATCTGTTTGAATGGTAGTAACAGAACAAGATTTGGAATTTTCTTGGAAATTTGATTATTGGGTTGTCGATTGGAAGGTA
AAGTTGCAATCTTGGAAAAAAATTGGGAAAAAAAGATGACATCTTCAGCTGTAAATTTGGTGATGACAGTGATTGGGTTTACAGTGAGCATTATA
TTCATAGTATTTGTGTGTACAAGGTTAATTTGTGCAAGAATTCAGTATTTGACAAGGAGGAGGTCTTCTGCATATACTTCTAGATCTGATCTTAG
CATTTTGGAACGTGGTTTACATGGGCTGGAGCCTCTTGCTGTGTCGAAGTTCCCCACGAAGAAGTACAGTGATGCATTTTTTTCATTTGCAGAAA
ATACTCAATGCATGATTTGCCTTGCTGAGTATCGGGAGGAAGATACATTACGTATTTTGCCATTATGTGGACACTACTTCCACGCCACATGCATC
GACATATGGTTTCAGCAGCACTCTACATGT
AAGTTGCAATCTTGGAAAAAAATTGGGAAAAAAAGATGACATCTTCAGCTGTAAATTTGGTGATGACAGTGATTGGGTTTACAGTGAGCATTATA
TTCATAGTATTTGTGTGTACAAGGTTAATTTGTGCAAGAATTCAGTATTTGACAAGGAGGAGGTCTTCTGCATATACTTCTAGATCTGATCTTAG
CATTTTGGAACGTGGTTTACATGGGCTGGAGCCTCTTGCTGTGTCGAAGTTCCCCACGAAGAAGTACAGTGATGCATTTTTTTCATTTGCAGAAA
ATACTCAATGCATGATTTGCCTTGCTGAGTATCGGGAGGAAGATACATTACGTATTTTGCCATTATGTGGACACTACTTCCACGCCACATGCATC
GACATATGGTTTCAGCAGCACTCTACATGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E311768] | SGN-U564201 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T122373 [Download] [View] | Facility Assigned ID: TRZBH61TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.960 | Expected Error Rate: 0.0107 | Quality Trim Threshold: 14.5 |
Working
