EST details — SGN-E312476

Search information 
Request: 312476Match: SGN-E312476
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C100040Clone name: cLEZ-20-D3
cartOrder Clone
Library Name: cLEZOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: root
Development Stage: germinating seedlings

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C193623 [TUS-68-L5] Trace: SGN-T346584 EST: SGN-E545709 Direction: 3' Facility: INRA (MWG)
Clone: SGN-C193623 [TUS-68-L5] Trace: SGN-T346585 EST: SGN-E545710 Direction: 5' Facility: INRA (MWG)
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Sequence 
Sequence Id: SGN-E312476Length: 475 bp (884 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E312476 [] (trimmed) CGCACCAGGGAAGCATTTATCACCTTTCAACAAATATGGCGCATTACTTACACCCATCTTTTTTCTTCTTATTATTCGTCACTTCGTTTTTAACA
AGTGATTATGTAATTCGATCAGACGCTCGTCATCTTCTTGAAATAACTCTGCCTAAGCTTCCTAAGCCCGAATTGCCACATTTACCTGAAATTCC
AACTTTGCCTAAGCCCGAGTTCCCTGAAATTCCAAAACCCGAGCTACCAACTCTACCAAAGCCCGAATTGCCAAAAATACCCAAAGCCTGAGTTC
CCAACCATTGCCAAAGCCTGAACTTCCAGCATTGCCAAAACTCGAGATACCTGTTATTCCTAAGCCTGAATTACCAATTTTTCCAAAGCTAGATA
TCCCTCAAGTACCTAAAAAGCCTTGAGCGCCAGGCGTATAAAATCATCTTTGCTTCGTTGAAGCAACATTGNTATATATATATATATATATGTAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E312476] SGN-U566370 Tomato 200607 Build 2 4 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T123944 [Download] [View] Facility Assigned ID: TRZDA14TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0341 Quality Trim Threshold: 14.5