EST details — SGN-E334416
Search information |
Request: 334416 | Match: SGN-E334416 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C131680 | Clone name: cTOD-23-A1 |
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Library Name: cTOD | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: flowers
Development Stage: anthesis-stage flowers from full grown plants
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E334416 | Length: 584 bp (884 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E334416 [] (trimmed)
GCGAAGTCAGACTTCGTCATCTTCAAATTCCTCTTCACCGTCTTCATCATCACCATCATCATCGACATCGTCGTGGATTCATTTGAGATCAGTTC
TATTCATTGTTGCCTCCTCACCAGCTTCTTCTTCTTCCTCTAATCGAGGTCATCTCAAATCACCATGGTCTCGTAGAAAAAGAAAACGTGCTCTT
GCGCCCCAACAGTGGAGAAGCTTTTTCACACCAGAAGGAAAACTTCGTGATGGTGGAATTAAAATTTCTAAAGAAAGTCCGAAGTGGAGGTGTTG
ATCCTAGTATCAGGGCCGAGGTTTGGCCATTTCTCCTGGGAGTCTATGAGTTGAACAGCTCTAAAGAAGAAAGAGATTGTATAAGAAATCAGAAG
AGGAGGGAATATGAGAGCTATCGTAGAGAATGTCGCAGACTGCTGAAACGCAATGGGACCTCTAAAATGAGGGAAACTGGTGGAATGGGAAGCGA
TGGTGAAGGAAATATCACTGAAGGGGATGGATTCCCTGATTATGACGATGTTGTTACTGCCCGGGAATCTCTCTCCAGTGGAGGACGGAGCACAT
ATGTCGAGGATTCT
TATTCATTGTTGCCTCCTCACCAGCTTCTTCTTCTTCCTCTAATCGAGGTCATCTCAAATCACCATGGTCTCGTAGAAAAAGAAAACGTGCTCTT
GCGCCCCAACAGTGGAGAAGCTTTTTCACACCAGAAGGAAAACTTCGTGATGGTGGAATTAAAATTTCTAAAGAAAGTCCGAAGTGGAGGTGTTG
ATCCTAGTATCAGGGCCGAGGTTTGGCCATTTCTCCTGGGAGTCTATGAGTTGAACAGCTCTAAAGAAGAAAGAGATTGTATAAGAAATCAGAAG
AGGAGGGAATATGAGAGCTATCGTAGAGAATGTCGCAGACTGCTGAAACGCAATGGGACCTCTAAAATGAGGGAAACTGGTGGAATGGGAAGCGA
TGGTGAAGGAAATATCACTGAAGGGGATGGATTCCCTGATTATGACGATGTTGTTACTGCCCGGGAATCTCTCTCCAGTGGAGGACGGAGCACAT
ATGTCGAGGATTCT
Unigenes |
Current Unigene builds | |||||
[SGN-E334416] | SGN-U567837 | Tomato 200607 | Build 2 | 21 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T146778 [Download] [View] | Facility Assigned ID: TFDDK01TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.971 | Expected Error Rate: 0.0168 | Quality Trim Threshold: 14.5 |