EST details — SGN-E335734
Search information |
Request: 335734 | Match: SGN-E335734 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C139592 | Clone name: cTOE-8-H1 |
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Library Name: cTOE | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Crown gall
Development Stage: crown galls from full-grown plants (4-8 wks old)
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E335734 | Length: 440 bp (885 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E335734 [] (trimmed)
GGAGAAGTCCAACACAAGTCCAAGCGTATATTATATTTGTGATTGAGCTAACAGATCCCACCATACCATTGTTGATTGCTTGCGAGTAGAGTAAT
TGTTTGTTGAAGGAGAAATGGCAAGGAGAGCAGACGAAGAGTACGATTACTTGTTCAAAATTGTGTTAATCGGAGATTCTGGAGTTGGAAAATCC
AATTTACTCTCCAGATTCACTAGAAATGAGTTCTGTTTGGAGTCTAAATCTACTATCGGCGTTGAATTTGCTACTCGTACTCTCAAGGTAGAGGG
AAGGACCATTAAGTCTCAGATCTGGGACACGGCTGGACAGGAGAGATATAGAGCCATTACGAGTGCATACTATAGGGGTGCTCTTGGTGCTCTTC
TGGTATATGATGTTACAAAACCTATTTCCTTTGAAAATGTGAGCCGGTGGTTAAAGGAAC
TGTTTGTTGAAGGAGAAATGGCAAGGAGAGCAGACGAAGAGTACGATTACTTGTTCAAAATTGTGTTAATCGGAGATTCTGGAGTTGGAAAATCC
AATTTACTCTCCAGATTCACTAGAAATGAGTTCTGTTTGGAGTCTAAATCTACTATCGGCGTTGAATTTGCTACTCGTACTCTCAAGGTAGAGGG
AAGGACCATTAAGTCTCAGATCTGGGACACGGCTGGACAGGAGAGATATAGAGCCATTACGAGTGCATACTATAGGGGTGCTCTTGGTGCTCTTC
TGGTATATGATGTTACAAAACCTATTTCCTTTGAAAATGTGAGCCGGTGGTTAAAGGAAC
Unigenes |
Current Unigene builds | |||||
[SGN-E335734] | SGN-U569325 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T149347 [Download] [View] | Facility Assigned ID: TAIBE37TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.973 | Expected Error Rate: 0.0048 | Quality Trim Threshold: 14.5 |