EST details — SGN-E336307
Search information |
Request: 336307 | Match: SGN-E336307 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C134708 | Clone name: cTOE-10-G18 |
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Library Name: cTOE | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Crown gall
Development Stage: crown galls from full-grown plants (4-8 wks old)
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E336307 | Length: 400 bp (913 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E336307 [] (trimmed)
GCATTAACAAAGACCCAATCTCTACATATTGTGCCTCTCGGACCTCATCATCATCGTTTGTGTCTATTCCCCTGTTTGTTTATCAATTCCTTGAT
TGCTTACCCACTATTCGATCTTCATTTTGATCTGAAACCTCAGGGTACTGGAGATTCTATGCACATATATTGATACTGTGTGGGTGCTGTTTTCA
TCATTGAAGGAACTGATATTGCAATTTCTACTTGAAGTTCTGTTTTCCCCCTGTTGTTATATATGGGCTGAAGTATATATTTATGGGACGTGCAG
AGGATGATGAACCACCACCAAAACGTGTGAAGGTATCCTCCAGAAAGGGAGATCTTCCAAAGAGTACACTTCTGACTGATCCTGCAAGTTGCTCA
CTGAATGACTTGATGGCTCA
TGCTTACCCACTATTCGATCTTCATTTTGATCTGAAACCTCAGGGTACTGGAGATTCTATGCACATATATTGATACTGTGTGGGTGCTGTTTTCA
TCATTGAAGGAACTGATATTGCAATTTCTACTTGAAGTTCTGTTTTCCCCCTGTTGTTATATATGGGCTGAAGTATATATTTATGGGACGTGCAG
AGGATGATGAACCACCACCAAAACGTGTGAAGGTATCCTCCAGAAAGGGAGATCTTCCAAAGAGTACACTTCTGACTGATCCTGCAAGTTGCTCA
CTGAATGACTTGATGGCTCA
Unigenes |
Current Unigene builds | |||||
[SGN-E336307] | SGN-U570622 | Tomato 200607 | Build 2 | 26 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T149653 [Download] [View] | Facility Assigned ID: TAIBL45TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.970 | Expected Error Rate: 0.0111 | Quality Trim Threshold: 14.5 |