EST details — SGN-E336616
| Search information |
| Request: 336616 | Match: SGN-E336616 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C138412 | Clone name: cTOE-4-D1 |
| ||
| Library Name: cTOE | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Crown gall
Development Stage: crown galls from full-grown plants (4-8 wks old)
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E336616 | Length: 342 bp (880 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E336616 [] (trimmed)
GGATGGTTGGGTTATCTGTGCCCTCAACATTGACCGGAACTTGCTGGAGAAGAGGACCGAGAATGAACACTCTGTTACTTCCTCCGCCGTCGCAA
CTGCCTTATCAATTCCATCCCCGACGTCAAATTCTTGGCCAACACTCCTCAACTTCCCATCTATCTATCTCCAACCAATTCAATATCAGTCTAGA
AGAAGAAGAGGAGGAGGAGGACTATGATGTCGGTTCATACTCAAATCAACGCTACGATTTCACTCGTGTGCTTCAATTTCTTTCCACCACCGAAC
CCAATTCAGATAATTCTTCACCCACACAACTCGACCCCACCGAGTTGCGCTTGGCTG
CTGCCTTATCAATTCCATCCCCGACGTCAAATTCTTGGCCAACACTCCTCAACTTCCCATCTATCTATCTCCAACCAATTCAATATCAGTCTAGA
AGAAGAAGAGGAGGAGGAGGACTATGATGTCGGTTCATACTCAAATCAACGCTACGATTTCACTCGTGTGCTTCAATTTCTTTCCACCACCGAAC
CCAATTCAGATAATTCTTCACCCACACAACTCGACCCCACCGAGTTGCGCTTGGCTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E336616] | SGN-U572977 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T148274 [Download] [View] | Facility Assigned ID: TAIAO13TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.963 | Expected Error Rate: 0.0370 | Quality Trim Threshold: 14.5 |
Working
