Notice: The SGN server will be upgraded later today. SGN may be intermittently unavailable during the upgrade. We apologize for any inconvenience.

EST details — SGN-E338455

Search information 
Request: 338455Match: SGN-E338455
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C136001Clone name: cTOE-15-M16
cartOrder Clone
Library Name: cTOEOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: Crown gall
Development Stage: crown galls from full-grown plants (4-8 wks old)

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E338455Length: 495 bp (682 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E338455 [] (trimmed) GCTGCAAAAAATTTATGCAAGATCCAATGGAAATTTATGTTGACGATGAGGCAAAGTTGACCCTTCATGGACTTGTACCAGCATTACCATCAAAT
TGAGTGAAACGGAGAAAAACCGGAAGCTAAATGATCTGCTGGATGCCTTGGACCTTCAATCAAGTGGTAATATTTGTCAAGAGTGTGAACAGGGC
AGCAGAGCTGAATAAATTACTAGCGGAGTGTAATTTTCCATCTATCTGCATCCACTCTGGCATGACTCAGGAGGAAAGATTGACGCCCCTACAAA
GCTTTCAAGGAGGGTCATAAGAGAATTCTTGTGGCAACTGATTTGGTTGGTAGGGGCATTGACATTGAAAGGGTTAACATTGTTATTAACTATGA
CATGCCAGATTCTGCAGACCACCTTACCTTCACAGAGTGGGTAGAGCTGGTAGGTTTGGGACGAAAGGCCTTGCCATTACATTTGTGTCCTCTGC
GTCAGATTCTGAAGTTCTTA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E338455] SGN-U577313 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T150718 [Download] [View] Facility Assigned ID: TAICF80TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0119 Quality Trim Threshold: 14.5