EST details — SGN-E339286
Search information |
Request: 339286 | Match: SGN-E339286 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C147289 | Clone name: cTOF-4-F21 |
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Library Name: cTOF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: shoot
Development Stage: developing shoots from 4-6wks old plants
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E339286 | Length: 740 bp (891 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E339286 [] (trimmed)
TCGGCAGCCGCTGCTACCCGTAGCAATGTTGCTCAAGCTAGCATGGTCGCACCCTTCACCGGACTCAAATCCGCCGCTTCTTTTCCCGTTACCAA
GAAGAACAACAACGTTGACATTACCTCCCTTGCTAGCAATGGTGGACGCGTTAGATGCATGCAGGTTATTCAAAAATAAGTGATTCAATTATCAG
TATGTATATATAATTTAAATTCAACGCGATTATTTTATAATCGTGGAATGTTTGACTAATGTAGGTGTGGCCACCAATCAACATGAAGAAATACG
AGACATTGTCATACCTTCCTGACTTGTCCGATGAGCAATTGCTTAGCGAAATTGAGTATCTTTTGAAAAATGGATGGGTTCCTTGCTTGGAATTC
GAGACTGAGGTCAATATCTCGTATTTTATTTAATGATTTATCTAATTATTTGAAGTTATAAAAATAATTTGAACTGTCGTTTGTTTGTAATATAT
GTATGTAACAGCGCGGATTTGTGTACCGAGAGAACAACAGTTCCCCTGGATACTACGATGGTAGATACTGGACCATGTGGAAGTTACCTATGTTT
GGGTGCACTGATGCAACACAGGTGTTGGCTGAGGTTCAAGAGGCGAAGAAGGCGTACCCACAAGCCTGGGTTCGTATTATCGGATTCGACAACGT
TCGTCAAGTCCAGTGCATCAGCTTCATTGCCTACAAGCCAGAAAGATTCTAAATTTCCAAACATATAATCAAAAT
GAAGAACAACAACGTTGACATTACCTCCCTTGCTAGCAATGGTGGACGCGTTAGATGCATGCAGGTTATTCAAAAATAAGTGATTCAATTATCAG
TATGTATATATAATTTAAATTCAACGCGATTATTTTATAATCGTGGAATGTTTGACTAATGTAGGTGTGGCCACCAATCAACATGAAGAAATACG
AGACATTGTCATACCTTCCTGACTTGTCCGATGAGCAATTGCTTAGCGAAATTGAGTATCTTTTGAAAAATGGATGGGTTCCTTGCTTGGAATTC
GAGACTGAGGTCAATATCTCGTATTTTATTTAATGATTTATCTAATTATTTGAAGTTATAAAAATAATTTGAACTGTCGTTTGTTTGTAATATAT
GTATGTAACAGCGCGGATTTGTGTACCGAGAGAACAACAGTTCCCCTGGATACTACGATGGTAGATACTGGACCATGTGGAAGTTACCTATGTTT
GGGTGCACTGATGCAACACAGGTGTTGGCTGAGGTTCAAGAGGCGAAGAAGGCGTACCCACAAGCCTGGGTTCGTATTATCGGATTCGACAACGT
TCGTCAAGTCCAGTGCATCAGCTTCATTGCCTACAAGCCAGAAAGATTCTAAATTTCCAAACATATAATCAAAAT
Unigenes |
Current Unigene builds | |||||
[SGN-E339286] | SGN-U577820 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T153545 [Download] [View] | Facility Assigned ID: TOFAO35TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.975 | Expected Error Rate: 0.0053 | Quality Trim Threshold: 14.5 |