EST details — SGN-E339562
Search information |
Request: 339562 | Match: SGN-E339562 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C136290 | Clone name: cTOE-16-K20 |
| ||
Library Name: cTOE | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: Crown gall
Development Stage: crown galls from full-grown plants (4-8 wks old)
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E339562 | Length: 562 bp (917 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E339562 [] (trimmed)
CTTCCCCACACACACATCAGAGGAGCAAAATCTTCTCTTTCAAGCAGTAGCCATGGCGAAACGTTTGATTCCAACAATTAACAGGGTTTTGATTG
AGAAAATCACAGCTCCTGCTAAAACAAGTGCCGGTATTCTTCTCCCTGAGAAGTCTGCTAAGCTGAATTCTGGGAAAGTGGTGGCTGTTGGGCCA
GGACTTCATGACAAGACAGGGAACTTAATCCCTACTGCTGTCAAGGAAGGTGACACCGTCTTGTTGCCCGAGTACGGTGGTACTCAAGTCAAGTT
GGGGGAGAAAGAGTATCATTTGTACCGGGATGAAGACATTTTGGGGACACTGCACGACTGAGCATCTATAACGTTTGAGTTTTCATTCACACTGT
TGAGGTTTATTTAAGGAGGTTGGGGAGGTTAATTTCAAGAATGTTTTTGGTTTAAGCACTCGAATCGTTAGTTGAATAACTGTTCTTTTAGTATT
GTGCAATTGAGGAGACTGGGGCTAACACATTATGTTTTATGGCAAATGCCAATGGTGTTCAATTAAAAAATGATGACACTATTTTCT
AGAAAATCACAGCTCCTGCTAAAACAAGTGCCGGTATTCTTCTCCCTGAGAAGTCTGCTAAGCTGAATTCTGGGAAAGTGGTGGCTGTTGGGCCA
GGACTTCATGACAAGACAGGGAACTTAATCCCTACTGCTGTCAAGGAAGGTGACACCGTCTTGTTGCCCGAGTACGGTGGTACTCAAGTCAAGTT
GGGGGAGAAAGAGTATCATTTGTACCGGGATGAAGACATTTTGGGGACACTGCACGACTGAGCATCTATAACGTTTGAGTTTTCATTCACACTGT
TGAGGTTTATTTAAGGAGGTTGGGGAGGTTAATTTCAAGAATGTTTTTGGTTTAAGCACTCGAATCGTTAGTTGAATAACTGTTCTTTTAGTATT
GTGCAATTGAGGAGACTGGGGCTAACACATTATGTTTTATGGCAAATGCCAATGGTGTTCAATTAAAAAATGATGACACTATTTTCT
Unigenes |
Current Unigene builds | |||||
[SGN-E339562] | SGN-U581265 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T151034 [Download] [View] | Facility Assigned ID: TAICJ70TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.968 | Expected Error Rate: 0.0166 | Quality Trim Threshold: 12.5 |