EST details — SGN-E339887

Search information 
Request: 339887Match: SGN-E339887
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C147130Clone name: cTOF-3-M18
cartOrder Clone
Library Name: cTOFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: shoot
Development Stage: developing shoots from 4-6wks old plants

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E339887Length: 761 bp (853 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E339887 [] (trimmed) GCTATGACAAAGAGTGTTGTGCAAGTGAATCAGCCTGCTGCCACAACAACTGATGGCCCATATTCCAGCTCAAGAGACCATTGATAACATAAATG
ACACAGAAGCTGATGGCTACTCAATCTATATAAAAGGCCTGCCTATGAGTGCAACTGTGGCATTACTTGCGGATGAGTTCAAGAAGTTTGGGCCA
ATAAAAAATGGAGGAATTCAAGTGAGAAGTAACAGGCAACAGGGATTTTGTTTTGGATTCGTGGAATTTGAAGTGGAAAGTGCTGTGCAAAAAGC
AATCGAGGCTTCTCCAGTTCTCATTGGTGATCGGCAAGCAGTGGTCGAGGAAAAGAGGTCTACCAATTCTCGACTTAATGCCAGAGGTGGTGGTA
GGTTTCAATCTGGAAGGGGCGGTGGATTCAGGAACGATGTTGGAGGAAGAGGGCGAGGAAACTATTTAGGTGGCAGGGGTTATGGTCGAGATGAT
TTCCATGGAAGAAATGAGTTCAATAACAGGGGTGGGAATCGTGGGGGTTCATCAAACCGTGGAGGTGAAGGATATCGGCGAGCTGACAATACAGG
TGGGCGAATGAGTCGTGGTGGTGGAATGTCTAATGGAACAGCCAAAGGCCCGGCTCCTCGCTATTCTGCTACAGCTTGAAGAGTAGTAGCTTAGT
ATAATTTATTTGAATCGACATTTAAAATGATTTATTGTTAAGGTGAACAGAAATTTTGTCAAGAGCTATGATGTTTTCTCAAAAAGGCTCTTTTG
C
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E339887] SGN-U585096 Tomato 200607 Build 2 16 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T153211 [Download] [View] Facility Assigned ID: TOFAJ81TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.968 Expected Error Rate: 0.0056 Quality Trim Threshold: 14.5