EST details — SGN-E339939

Search information 
Request: 339939Match: SGN-E339939
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C146986Clone name: cTOF-3-F22
cartOrder Clone
Library Name: cTOFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: shoot
Development Stage: developing shoots from 4-6wks old plants

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E339939Length: 692 bp (861 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E339939 [] (trimmed) GCCATTAAACTTTACTCCATTCATCATTTGTATTGTGATAAAGGTGGAGGAAAGAACACAGATAGAGAAAGATTTTGAGCAAATAAAAGAACAAG
TTGAGGGAGTTGCTGAGAAGGGCGAATTGGGTTTGGAAGAATGAGTGCTTCTAGGTTTATAAAGTGTGTTACCGTGGGCGATGGAGCTGTGGGTA
AAACTTGTCTTCTCATTTCGTATACCAGCAACACTTTTCCCACTGATTATGTCCCAACTGTATTTGACAATTTTAGTGCAAATGTGGTTGTCGAT
GGGAGCACTGTTAATCTGGGGCTCTGGGATACTGCAGGTCAGGAGGATTACAATAGATTAAGACCTTTGAGCTATCGTGGGGCTGATGTATTTAT
ACTGGCATTTTCTCTCATTAGCAAGGCGAGCTATGAAAATGTCTCCAAAAAGTGGATTCCTGAATTGAGGCATTATGCTCCTGGAGTTCCAATTA
TTCTTGTTGGAACAAAGCTAGATCTCCGAGAGGATAAGCAATTCTTTGTGGACCATCCAGGTGCTGTTCCACTTAGCACTGCTCAGGGTGAGGAG
CTGAGAAAGTCGATTGGTGCTGCTGCTTACATTGAATGTAGTGCAAAAACTCAACAGAACATTAAGGCTGTTTTTGATGCGGCCATTAANGGTGG
TCCTACAACCACCCAAGCAAAAGAAGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E339939] SGN-U578524 Tomato 200607 Build 2 40 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T153263 [Download] [View] Facility Assigned ID: TOFAL35TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.975 Expected Error Rate: 0.0071 Quality Trim Threshold: 14.5