EST details — SGN-E342875

Search information 
Request: 342875Match: SGN-E342875
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C148346Clone name: cTOF-7-P20
cartOrder Clone
Library Name: cTOFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: shoot
Development Stage: developing shoots from 4-6wks old plants

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
No additional reads found.
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Sequence 
Sequence Id: SGN-E342875Length: 632 bp (887 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E342875 [] (trimmed) GCATAGTTTTTGTCTTGCAACAGAAGGAACATCCCAAGTTTAAGCGGAAGGGAGATGATCTCTTTGTAGAGCACACCTTGAGCTTAACCGAGGCC
CTGTGTGGTTTCCAGTTCATCTTGACTCACCTAGATACCAGGCAGCTGATCATCAAGTCCCAACCCGGAGAAGTTGTCAAACCTGATCAATTTAA
GGCCATAAATGATGAAGGAATGCCGATGTACCAAAGGCCATTTATGAGAGGAAAACTATACATTCACTTCACCGTAGAATTCCCCGACACATTAT
CCCTCGAGCAATGCAAGAACCTTGAAGCAGTATTGCCACCAAAACCCAAAACCCAAATGACTGATATGGAATTGGACGAGTGCGAGGAGACCACG
TTACATGATGTTAACATCGAAGAGGAGATGCGTAGGAAGCAGCAACAGGCCCAAGAGGCATACGACGAAGACGATGAAGACATGCATGGTGGTGC
ACAGAGAGTTCAATGTGCACAACAGTAATTTGGTAACACGGAATTAACGTCACGATTCAACTCTTGTTTTCACGTATTTGTAATGACATTACTAG
CTTATAAATTTCGAGTTTTGAATTTGCTAATCTATACTGTTAACGTTACAAACATATTATTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E342875] SGN-U578090 Tomato 200607 Build 2 217 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T154618 [Download] [View] Facility Assigned ID: TOFBB94THB
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read -- flanking 3' vector arm detected.
Passed all screens and filters
Sequence Entropy: 0.971 Expected Error Rate: 0.0062 Quality Trim Threshold: 12.5