EST details — SGN-E346023
| Search information |
| Request: 346023 | Match: SGN-E346023 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C143849 | Clone name: cTOF-24-I12 |
| ||
| Library Name: cTOF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: shoot
Development Stage: developing shoots from 4-6wks old plants
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
No additional reads found.[Show information hierarchy]
| Sequence |
| Sequence Id: SGN-E346023 | Length: 683 bp (981 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E346023 [] (trimmed)
GCAGCAATGGCTTCTTCAGTAATGTCCTCAGCAGCTGTTGCCACCCGCGGCAATGGTGCACAAGCTAGCATGGTTGCACCCTTCACTGGACTCAA
GTCCACCGCTTCTTTCCCTGTTTCAAGGAAGCAAAACCTTGACATTACCTCCATTGCTAGCAACGGTGGAAGAGTCAGTTGCATGCAGGTGTGGC
CACCAATTAACATGAAGAAGTACGAGACTCTGTCGTACCTTCCTGATTTGTCCGACGAGCAATTGCTCAGCGAAATTGAGTACCTATTGAAAAAT
GGATGGGTTCCTTGCTTGGAATTCGAGACTGAGCACGGATTTGTGTACCGTGAGAACCATAAGTCACCAGGATACTACGATGGCAGATACTGGAC
NCATGTGGAAGTTGCCCATGTTCGGGTGCACTGATGCAACCCAGGTCTTGGCTGAGGTGCAGGAGGCAAAGAAGGCTTACCCACAGGCATGGGGT
CCGTATCATCGGATTCGACAATGTTCGTCAAGTGCAGTGCATCAGTTTCATCGCTTACAAGCCCGAAGATACTAAGTTCTAGAAAAATAATTGCC
CTATGTTTATGGGACAGTTTGTTTGAATTCTCTTTTGGGTTTCCCTTGAGAATTGTATTCATNTCCCTTGTTTCCATCTTTTATTCCGTGTATGA
TAATTCGAATTCAATCAA
GTCCACCGCTTCTTTCCCTGTTTCAAGGAAGCAAAACCTTGACATTACCTCCATTGCTAGCAACGGTGGAAGAGTCAGTTGCATGCAGGTGTGGC
CACCAATTAACATGAAGAAGTACGAGACTCTGTCGTACCTTCCTGATTTGTCCGACGAGCAATTGCTCAGCGAAATTGAGTACCTATTGAAAAAT
GGATGGGTTCCTTGCTTGGAATTCGAGACTGAGCACGGATTTGTGTACCGTGAGAACCATAAGTCACCAGGATACTACGATGGCAGATACTGGAC
NCATGTGGAAGTTGCCCATGTTCGGGTGCACTGATGCAACCCAGGTCTTGGCTGAGGTGCAGGAGGCAAAGAAGGCTTACCCACAGGCATGGGGT
CCGTATCATCGGATTCGACAATGTTCGTCAAGTGCAGTGCATCAGTTTCATCGCTTACAAGCCCGAAGATACTAAGTTCTAGAAAAATAATTGCC
CTATGTTTATGGGACAGTTTGTTTGAATTCTCTTTTGGGTTTCCCTTGAGAATTGTATTCATNTCCCTTGTTTCCATCTTTTATTCCGTGTATGA
TAATTCGAATTCAATCAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E346023] | SGN-U580869 | Tomato 200607 | Build 2 | 1124 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T158971 [Download] [View] | Facility Assigned ID: TOFDP54TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.995 | Expected Error Rate: 0.0145 | Quality Trim Threshold: 14.5 |
Working
