EST details — SGN-E349050
Search information |
Request: 349050 | Match: SGN-E349050 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C145537 | Clone name: cTOF-29-P18 |
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Library Name: cTOF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: shoot
Development Stage: developing shoots from 4-6wks old plants
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E349050 | Length: 745 bp (897 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E349050 [] (trimmed)
CATGCGTAAAAACGTGCATGTCACAAGAGAGCATAGCTGAATATGCATCTGATAAAGAATAATCACTATCTCTACAGCCACATGCAAACACCAAT
CAGTTTCCCTTCAGCAAAACATGTTAACTACAAAGGAAGAAACTAAAAAGGAGAGTAATGAAGCTGTAAAATAAAACAATATGAAGGAGCTAAAA
GAACAGCCTTCGAGTAGGTGTCCGTGAGGTTGTTGAAGGTGTGTTTGATGATCTCAGGGTAACAGGTGATGCCATGTTTTCTTTGATTCCTGCCC
CCTTCTCGATTAGCTTTGCTCCCCGTGGATCAGATAGAAGTGTCTTCTGAAACGACTGGGTGAAACCAGTTGCAATTATTGTCACGTGTATTTCA
CCATTGTAACGCTCATCAACAACAGCACCAAATATGATGTTAGCAGAGGGATCAGCTAGACTGGTAACAACCTGGGACACCCTATTCACTTCTTG
CAAAGTTATGTCTTTTCCTCCTGTAATGTTATATACTACCCCAGTTGCAGATTGAATTGACGACCCAATTAGAGGGGCCAGAGTTGCTTGTTCGG
CTGCTTCTTCAGCTCGGTTCTTACTTGATGAAACACCCACTCCGAGCATTGCAGTTCCAGAGTCTTTCATCACTGCCTTTACATCGGCAAAATCC
ACATTCACAAGCCCAGGAATAGTGATTATATCAGATATTCCTTGGACACCTTTGACGTAATACATCATCCGCAAGAAGAA
CAGTTTCCCTTCAGCAAAACATGTTAACTACAAAGGAAGAAACTAAAAAGGAGAGTAATGAAGCTGTAAAATAAAACAATATGAAGGAGCTAAAA
GAACAGCCTTCGAGTAGGTGTCCGTGAGGTTGTTGAAGGTGTGTTTGATGATCTCAGGGTAACAGGTGATGCCATGTTTTCTTTGATTCCTGCCC
CCTTCTCGATTAGCTTTGCTCCCCGTGGATCAGATAGAAGTGTCTTCTGAAACGACTGGGTGAAACCAGTTGCAATTATTGTCACGTGTATTTCA
CCATTGTAACGCTCATCAACAACAGCACCAAATATGATGTTAGCAGAGGGATCAGCTAGACTGGTAACAACCTGGGACACCCTATTCACTTCTTG
CAAAGTTATGTCTTTTCCTCCTGTAATGTTATATACTACCCCAGTTGCAGATTGAATTGACGACCCAATTAGAGGGGCCAGAGTTGCTTGTTCGG
CTGCTTCTTCAGCTCGGTTCTTACTTGATGAAACACCCACTCCGAGCATTGCAGTTCCAGAGTCTTTCATCACTGCCTTTACATCGGCAAAATCC
ACATTCACAAGCCCAGGAATAGTGATTATATCAGATATTCCTTGGACACCTTTGACGTAATACATCATCCGCAAGAAGAA
Unigenes |
Current Unigene builds | |||||
[SGN-E349050] | SGN-U566680 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T160618 [Download] [View] | Facility Assigned ID: TOFEL93TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.977 | Expected Error Rate: 0.0032 | Quality Trim Threshold: 14.5 |