EST details — SGN-E350400
Search information |
Request: 350400 | Match: SGN-E350400 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C166062 | Clone name: cTOS-5-F3 |
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Library Name: cTOS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: suspension cultures
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E350400 | Length: 681 bp (928 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E350400 [] (trimmed)
GTTTTATCTTCCAACTGAAATCAAGAAACGCAACAAAGATGTACTTGTAGGATCTGGGTACATGGCTCCTAGTGAAAAAAACCCTCTTTATGAAG
CTTTTGGTCTCTATAATATGTCTTGTCATGAAGATTTAGATGAGTTTTGTACTCAGTTGGATGCATCTCCACACCAAAGAGAGACAATTAAGAAG
TATGCTGCAGCAATTAATGGACTAATGATGGACATTCTGCGAAAGATGAGTGAAGGGTTGGGACTGCCAAATGTTTCTTTTGAGGATTGGCCTTG
TCAGTTTAGGATTAACAAGTACAACTTCACGCCAGAAGTTGTAGGTTCCTCTGGGGTTCAGATACACACAGACTTGGCATTCCTTACTATTCTAC
AGGATGATGAAAGCGTTGGTGGTCTTGAGGTAATGAAGAAGTCTGGTGAATTTGTAGCAGTTGATCGTTGGCCAAACACCCTCCTTGTGAATCTT
GGAGACATAGGCACGGTATGGAGCAATGGAAGATTACACTCTGTCAAGCATAGAGTGATATGCAAGGAAGCAAAACTACGGGTATCTATTGCTTC
ATTCATCTTGGGAACAAGGGACACAGCAGTGGAACCACCATCTGAGCTGGTAGATGCTGAACACCCCCGTATGTATGTCCTTTTCACTTTCACTG
ATTATAGAAAGCTCCG
CTTTTGGTCTCTATAATATGTCTTGTCATGAAGATTTAGATGAGTTTTGTACTCAGTTGGATGCATCTCCACACCAAAGAGAGACAATTAAGAAG
TATGCTGCAGCAATTAATGGACTAATGATGGACATTCTGCGAAAGATGAGTGAAGGGTTGGGACTGCCAAATGTTTCTTTTGAGGATTGGCCTTG
TCAGTTTAGGATTAACAAGTACAACTTCACGCCAGAAGTTGTAGGTTCCTCTGGGGTTCAGATACACACAGACTTGGCATTCCTTACTATTCTAC
AGGATGATGAAAGCGTTGGTGGTCTTGAGGTAATGAAGAAGTCTGGTGAATTTGTAGCAGTTGATCGTTGGCCAAACACCCTCCTTGTGAATCTT
GGAGACATAGGCACGGTATGGAGCAATGGAAGATTACACTCTGTCAAGCATAGAGTGATATGCAAGGAAGCAAAACTACGGGTATCTATTGCTTC
ATTCATCTTGGGAACAAGGGACACAGCAGTGGAACCACCATCTGAGCTGGTAGATGCTGAACACCCCCGTATGTATGTCCTTTTCACTTTCACTG
ATTATAGAAAGCTCCG
Unigenes |
Current Unigene builds | |||||
[SGN-E350400] | SGN-U564520 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T163014 [Download] [View] | Facility Assigned ID: TSCAS26TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.981 | Expected Error Rate: 0.0128 | Quality Trim Threshold: 14.5 |