EST details — SGN-E354400
Search information |
Request: 354400 | Match: SGN-E354400 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C162024 | Clone name: cTOS-17-G18 |
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Library Name: cTOS | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: suspension cultures
Development Stage:
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E354400 | Length: 400 bp (936 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E354400 [] (trimmed)
CAGAAAAGGGAAAACCAGCAAAAGAATCCACTTCGTCAGGAGCCTCATCAGAGAAGTTGCTGGATTTGCTCCATATGAGAAGAGGATTACTGAGC
TTCTTAAAGTTGGTAAGGACAAGCGTGCATTGAAGGTAGCCAAGAGGAAGTTGGGTACCCACAAGAGGGCAAAGAAGAAGAGAGAGGAGATGTCC
AGCGTTCTCCGTAAGATGAGGGCAACCGGTGGTGGTGAAAAGAAGAAGTGAAGTCTCTATCCTTATTTTGACAATTGAGGAACTGAGTTTATTAG
TTAATACATGATCTTTTTGAGTTAGCTATAAAATTCTCTAAACTTTGACACAATTATGGCTTTGAATTTTCATTGAGATTGTGACATTTTGCTCA
AACAAGTCTACATTTTAGTT
TTCTTAAAGTTGGTAAGGACAAGCGTGCATTGAAGGTAGCCAAGAGGAAGTTGGGTACCCACAAGAGGGCAAAGAAGAAGAGAGAGGAGATGTCC
AGCGTTCTCCGTAAGATGAGGGCAACCGGTGGTGGTGAAAAGAAGAAGTGAAGTCTCTATCCTTATTTTGACAATTGAGGAACTGAGTTTATTAG
TTAATACATGATCTTTTTGAGTTAGCTATAAAATTCTCTAAACTTTGACACAATTATGGCTTTGAATTTTCATTGAGATTGTGACATTTTGCTCA
AACAAGTCTACATTTTAGTT
Unigenes |
Current Unigene builds | |||||
[SGN-E354400] | SGN-U580851 | Tomato 200607 | Build 2 | 70 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T166968 [Download] [View] | Facility Assigned ID: TSCCN45TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.951 | Expected Error Rate: 0.0000 | Quality Trim Threshold: 12.5 |