EST details — SGN-E354712
| Search information |
| Request: 354712 | Match: SGN-E354712 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C103144 | Clone name: cLHT-5-F2 |
| ||
| Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C193693 [TUS-68-O3] | Trace: SGN-T346704 | EST: SGN-E545829 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C193693 [TUS-68-O3] | Trace: SGN-T346705 | EST: SGN-E545830 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E354712 | Length: 285 bp (1051 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E354712 [] (trimmed)
GATAATTAAATTGTTGTCATTAATCAATGGTTTGATGTAGTGATACTAGGTATTGCAATAAGAGGAATAGCCTTCTTTAAAGTAACTCCAAACTG
TTCCTCCATGTCCAATTTTTCTGGTGTCATTCCATCAGGTAACTTCCAACTAAATGGTTGTATAATAGAAGCCAATATCAAATTCACCATTCTTA
TAGCCAGCGGCATACCTGGACATATTCTCCTGCCCGCGCTAAATGGTATAAACTCAAAATCTCTACCTTTATAATCCACACTAGATTCCATGAAT
TTCCTCCATGTCCAATTTTTCTGGTGTCATTCCATCAGGTAACTTCCAACTAAATGGTTGTATAATAGAAGCCAATATCAAATTCACCATTCTTA
TAGCCAGCGGCATACCTGGACATATTCTCCTGCCCGCGCTAAATGGTATAAACTCAAAATCTCTACCTTTATAATCCACACTAGATTCCATGAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E354712] | SGN-U586367 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T169928 [Download] [View] | Facility Assigned ID: THTAT25TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.953 | Expected Error Rate: 0.0012 | Quality Trim Threshold: 14.5 |
Working
