EST details — SGN-E355548
Search information |
Request: 355548 | Match: SGN-E355548 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C101439 | Clone name: cLHT-19-I10 |
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Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
No additional reads found.[Show information hierarchy]
Sequence |
Sequence Id: SGN-E355548 | Length: 465 bp (903 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E355548 [] (trimmed)
GATTGTGAAGGAATTGAGAGGGACGTACGGGAGTGGGAAGACGAAGAGTTACGAGTGGAGAGTGTCGCAGTTGAAAAGTTTATTGAAGATTGCTG
AGAATCATGAGAAGGAGATTACCGATGCTCTTTATTCTGACCTCTCTAAGTCTGAATTTGAAGCCTTTATTTATGAGGTTTCTATAATGAAAACA
ACATGTAAACTTGCATTGAAGGAACTAAAACGGTGGATGAAGCCGGAAAAAGTCAAAACTTCAATAACCTCGTTTCCTTCATCAGCTGAAATAGT
TCCAGAACCTCTCGGTGTTGTATTGGTCATATCAGCATGGAACTATCCGTTCTTGTTGTCCCTTGATCCAGTGATTGGAGCTATTGCTGCTGGTA
ATGCAGTAATTCTGAAACCATCAGAAATAGCCCCAGCTACATCTTCAGTGCTTGCAAAGCTATTAGGGCAGTATATGGATGTGTC
AGAATCATGAGAAGGAGATTACCGATGCTCTTTATTCTGACCTCTCTAAGTCTGAATTTGAAGCCTTTATTTATGAGGTTTCTATAATGAAAACA
ACATGTAAACTTGCATTGAAGGAACTAAAACGGTGGATGAAGCCGGAAAAAGTCAAAACTTCAATAACCTCGTTTCCTTCATCAGCTGAAATAGT
TCCAGAACCTCTCGGTGTTGTATTGGTCATATCAGCATGGAACTATCCGTTCTTGTTGTCCCTTGATCCAGTGATTGGAGCTATTGCTGCTGGTA
ATGCAGTAATTCTGAAACCATCAGAAATAGCCCCAGCTACATCTTCAGTGCTTGCAAAGCTATTAGGGCAGTATATGGATGTGTC
Unigenes |
Current Unigene builds | |||||
[SGN-E355548] | SGN-U579227 | Tomato 200607 | Build 2 | 59 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T170253 [Download] [View] | Facility Assigned ID: THTCV53TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.964 | Expected Error Rate: 0.0104 | Quality Trim Threshold: 14.5 |