EST details — SGN-E355960
Search information |
Request: 355960 | Match: SGN-E355960 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C101665 | Clone name: cLHT-21-D12 |
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Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C193872 [TUS-69-F14] | Trace: SGN-T347012 | EST: SGN-E546137 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C193872 [TUS-69-F14] | Trace: SGN-T347013 | EST: SGN-E546138 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E355960 | Length: 423 bp (872 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E355960 [] (trimmed)
AAAAATTCAAATATTAGTTACAGCATGTTGTTGTGCCATAACAATTACTCTGTTAGTTTGTTTATGGAAAGTACTGAATTGGGTTTGGTTCAGTC
CAAAGAAGTTGGAGAAATTGTTGAGGAAACAAGGGCTAAATGGGAATTCATACAGATTATTGTATGGAGACATGAAAGATTTTTCTAAGATGATT
AAAGAAGCTAATTCAAAGCCCATGAATTTGTCTGATGATATAACTCCAAGATTGGTGCCTTTCTTTCTTGAAACCATCAAGAAATATGGGAAAAA
ATCTTTTATATGGTTGGGTCCAAAACCACATGTACTAATCATGGACCCGGAGCTTATAAAGGAAGTATTCTCGAAAAACTATTTGTATCAAAAGC
CTCATGGAAATCCATTTGCAGCATTATTTGTACAAGGACTACC
CAAAGAAGTTGGAGAAATTGTTGAGGAAACAAGGGCTAAATGGGAATTCATACAGATTATTGTATGGAGACATGAAAGATTTTTCTAAGATGATT
AAAGAAGCTAATTCAAAGCCCATGAATTTGTCTGATGATATAACTCCAAGATTGGTGCCTTTCTTTCTTGAAACCATCAAGAAATATGGGAAAAA
ATCTTTTATATGGTTGGGTCCAAAACCACATGTACTAATCATGGACCCGGAGCTTATAAAGGAAGTATTCTCGAAAAACTATTTGTATCAAAAGC
CTCATGGAAATCCATTTGCAGCATTATTTGTACAAGGACTACC
Unigenes |
Current Unigene builds | |||||
[SGN-E355960] | SGN-U577654 | Tomato 200607 | Build 2 | 13 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T170146 [Download] [View] | Facility Assigned ID: THTDF18TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.949 | Expected Error Rate: 0.0118 | Quality Trim Threshold: 14.5 |