EST details — SGN-E356063
Search information |
Request: 356063 | Match: SGN-E356063 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C103247 | Clone name: cLHT-7-E15 |
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Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C193718 [TUS-68-P4] | Trace: SGN-T346747 | EST: SGN-E545872 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C193718 [TUS-68-P4] | Trace: SGN-T346748 | EST: SGN-E545873 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E356063 | Length: 354 bp (936 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E356063 [] (trimmed)
TGCTGAATCACCTATCTGGACCAATTCCAAAGTACTTATGAAACATGACGTTCCTAGTTCATATGAGATTGGAAAGTAATATGTTGAATGGAACT
GGTCCAAAAGAACTCGGAGGCATGGTTAATCTACAGGTTCTTATTCTTAGGTTTAATAATCTCACAGGTCACTTACCAGAGGAGCTCAGTAAACT
CACTAATTTGAAAGAACTTAAGCTGACAGGTAACAACTTCGCAGGAAAACTTTCTAACTTAGAGAGTTTTAAAACCCTTCAAAGATTAGAGATTC
AAGCTTCTGGTTTTGAAGGACCTATATCTGCAATCATTTCTGACTCAACTCAAATGATCGAATTGAGAA
GGTCCAAAAGAACTCGGAGGCATGGTTAATCTACAGGTTCTTATTCTTAGGTTTAATAATCTCACAGGTCACTTACCAGAGGAGCTCAGTAAACT
CACTAATTTGAAAGAACTTAAGCTGACAGGTAACAACTTCGCAGGAAAACTTTCTAACTTAGAGAGTTTTAAAACCCTTCAAAGATTAGAGATTC
AAGCTTCTGGTTTTGAAGGACCTATATCTGCAATCATTTCTGACTCAACTCAAATGATCGAATTGAGAA
Unigenes |
Current Unigene builds | |||||
[SGN-E356063] | SGN-U568430 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T170940 [Download] [View] | Facility Assigned ID: THTAY32TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.952 | Expected Error Rate: 0.0295 | Quality Trim Threshold: 14.5 |