EST details — SGN-E357222
Search information |
Request: 357222 | Match: SGN-E357222 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C101310 | Clone name: cLHT-17-J9 |
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Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C193834 [TUS-69-D24] | Trace: SGN-T346947 | EST: SGN-E546072 | Direction: 3' | Facility: INRA (MWG) |
Clone: SGN-C193834 [TUS-69-D24] | Trace: SGN-T350186 | EST: SGN-E549311 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E357222 | Length: 484 bp (830 bp untrimmed) |
Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E357222 [] (trimmed)
TGTGTTGCGCAAAGATGCCAATCCAGAGCTTGCCTTAGCTGTTGATATATGGAGCCTGGGCTGTACTGTTATTGAGATGTTTACTGGACAGCCCC
CTTGGGGCGAACTTAGTTGGGTGCAAGCAATGTTCGGTGTCCTGAACAAATCACCACCTATACCAGAAAAATTATCATCAGAAGGAAAAGATTTC
CTTCAGTGCTGCTTTCGGAGGAAACCTGCAGATAGGCCATCAGCTATGATGCTACTTGAACATGCTTTTTTACGTAGTACTAGTTCCCTTGAGCA
TAGTATCAATGTTGCTGGTTGCTCAGAGGATTCTCCGGGGAAGAAATTCCATGATACCCTGAGTCCTAAGAACCCAATGAACCACAAAATGGAAC
AAAAACCACTATTACCAGGAACATCTGGCTGGCAAGCAAAATCACCATGTAGCAGTGAAACTTGCCGGCAAACTCAACCTGAAACCTGTGAATAT
GGAGCAACT
CTTGGGGCGAACTTAGTTGGGTGCAAGCAATGTTCGGTGTCCTGAACAAATCACCACCTATACCAGAAAAATTATCATCAGAAGGAAAAGATTTC
CTTCAGTGCTGCTTTCGGAGGAAACCTGCAGATAGGCCATCAGCTATGATGCTACTTGAACATGCTTTTTTACGTAGTACTAGTTCCCTTGAGCA
TAGTATCAATGTTGCTGGTTGCTCAGAGGATTCTCCGGGGAAGAAATTCCATGATACCCTGAGTCCTAAGAACCCAATGAACCACAAAATGGAAC
AAAAACCACTATTACCAGGAACATCTGGCTGGCAAGCAAAATCACCATGTAGCAGTGAAACTTGCCGGCAAACTCAACCTGAAACCTGTGAATAT
GGAGCAACT
Unigenes |
Current Unigene builds | |||||
[SGN-E357222] | SGN-U583415 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T170887 [Download] [View] | Facility Assigned ID: THTCO53TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.971 | Expected Error Rate: 0.0154 | Quality Trim Threshold: 14.5 |