EST details — SGN-E358115
Search information |
Request: 358115 | Match: SGN-E358115 |
Request From: SGN database generated link | Match Type: EST sequence internal identifier |
Clone information |
SGN ID: SGN-C102024 | Clone name: cLHT-23-D10 |
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Library Name: cLHT | Organism: Solanum habrochaites (formerly Lycopersicon hirsutum) |
Tissue: leaf trichomes
Development Stage: 4-8 weeks old
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing |
Clone: SGN-C193969 [TUS-69-J15] | Trace: SGN-T347179 | EST: SGN-E546304 | Direction: 5' | Facility: INRA (MWG) |
Sequence |
Sequence Id: SGN-E358115 | Length: 451 bp (911 bp untrimmed) |
Status: Current Version | Direction: 5' |
>SGN-E358115 [] (trimmed)
GCTTTTGTTCTTCTCTGTTCCCATATTATAAAGGCATATTCAAAGAATAACCTCCTCCTGTTGGGATCACCTTATGCCTCACCATTCAAGTTGCA
CTTCTCTGTATGAGGCGATCGGTCCTCATTTTGATTGCTCCAACAACAACAACGTACCTAGTGATCCCACAAGTGGTGTGGTGTTTGGGGAGGGT
ACGGTTATCCATAATGTTTGGATGGGGTGCAAGGAGGAGTGACAACTCCAAGTACTATGAGGTTCTTGGTGTTTCGAAGAATTCCAGTCAAGATG
AACTTAAGAAGGCATACAGAAAATCTGCTATAAAGAATCATCCTGATAAGGGTGGGGACCCTGAAAAAGTGAGTTGTCCCTTCTCGCACGCGCTG
TTAGGATTTTCTGCATCTTGCGATTCTAGATATGTTACATCTATACCAAAGGAACCTTTTGATTCTGATGC
CTTCTCTGTATGAGGCGATCGGTCCTCATTTTGATTGCTCCAACAACAACAACGTACCTAGTGATCCCACAAGTGGTGTGGTGTTTGGGGAGGGT
ACGGTTATCCATAATGTTTGGATGGGGTGCAAGGAGGAGTGACAACTCCAAGTACTATGAGGTTCTTGGTGTTTCGAAGAATTCCAGTCAAGATG
AACTTAAGAAGGCATACAGAAAATCTGCTATAAAGAATCATCCTGATAAGGGTGGGGACCCTGAAAAAGTGAGTTGTCCCTTCTCGCACGCGCTG
TTAGGATTTTCTGCATCTTGCGATTCTAGATATGTTACATCTATACCAAAGGAACCTTTTGATTCTGATGC
Unigenes |
Current Unigene builds | |||||
[SGN-E358115] | SGN-U583042 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
Follow SGN-U# link for detailed information and annotations |
Chromatogram |
SGN-ID: SGN-T170675 [Download] [View] | Facility Assigned ID: THTDN17TH |
Submitter: Koni | Sequencing Facility: TIGR |
Quality processing |
Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
Sequence Entropy: 0.976 | Expected Error Rate: 0.0158 | Quality Trim Threshold: 14.5 |